RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 HTR3DQ70Z44 454 aa14.92□□□□□ -0.02
DDX11-228ENST00000545115 TMEM25Q86YD3 366 aa14.92□□□□□ -0.02
DDX11-228ENST00000545115 PGBD3Q8N328 593 aa14.92□□□□□ -0.02
DDX11-228ENST00000545115 C12orf29Q8N999 325 aa14.92□□□□□ -0.02
DDX11-228ENST00000545115 PIGKQ92643 395 aa14.92□□□□□ -0.02
DDX11-228ENST00000545115 WBP2Q969T9 261 aa14.92□□□□□ -0.02
DDX11-228ENST00000545115 CYLDQ9NQC7 956 aa14.92□□□□□ -0.02
DDX11-228ENST00000545115 EVLQ9UI08 416 aaPredicted RBP14.92□□□□□ -0.02
DDX11-228ENST00000545115 HPSEQ9Y251 543 aa14.92□□□□□ -0.02
DDX11-228ENST00000545115 MYOFQ9NZM1 2061 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 THADAQ6YHU6 1953 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 MAP3K13O43283 966 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 ATP5C1P36542 298 aaKnown RBP14.91□□□□□ -0.02
DDX11-228ENST00000545115 DPP6P42658 865 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 PGFP49763 221 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 VAMP7P51809 220 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 MAP7D1Q3KQU3 841 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 SPDYCQ5MJ68 293 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 C1orf220Q5T0J3 134 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 GRAMD4Q6IC98 578 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 INTS8Q75QN2 995 aaKnown RBP14.91□□□□□ -0.02
DDX11-228ENST00000545115 GPRIN1Q7Z2K8 1008 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 HNRNPABQ99729 332 aaKnown RBP14.91□□□□□ -0.02
DDX11-228ENST00000545115 NT5C1AQ9BXI3 368 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 KLF16Q9BXK1 252 aaPredicted RBP14.91□□□□□ -0.02
DDX11-228ENST00000545115 PNPLA8Q9NP80 782 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 LSM7Q9UK45 103 aaKnown RBP14.91□□□□□ -0.02
DDX11-228ENST00000545115 SCML2Q9UQR0 700 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 PCDHA5Q9Y5H7 936 aa14.91□□□□□ -0.02
DDX11-228ENST00000545115 MAP1BP46821 2468 aaKnown RBP14.9□□□□□ -0.02
DDX11-228ENST00000545115 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 HHLA1C9JL84 531 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 NEDD8-MDP1E9PL57 170 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 CDX4O14627 284 aaPredicted RBP14.9□□□□□ -0.02
DDX11-228ENST00000545115 CYP26A1O43174 497 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 GREM1O60565 184 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 RHOBTB3O94955 611 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 TBX18O95935 607 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 ACO1P21399 889 aaKnown RBP14.9□□□□□ -0.02
DDX11-228ENST00000545115 NR2F2P24468 414 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 PTGER3P43115 390 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 IRX4P78413 519 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 LMAN2Q12907 356 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 NFIL3Q16649 462 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 TRIM61Q5EBN2 209 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 ARMCX6Q7L4S7 300 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 SYT12Q8IV01 421 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 TMEFF1Q8IYR6 380 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 FRMD1Q8N878 549 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 SPRYD3Q8NCJ5 442 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 CCDC47Q96A33 483 aaKnown RBP14.9□□□□□ -0.02
DDX11-228ENST00000545115 JAKMIP2Q96AA8 810 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 CYFIP2Q96F07 1278 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 SPATA32Q96LK8 384 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 XPO6Q96QU8 1125 aaKnown RBP14.9□□□□□ -0.02
DDX11-228ENST00000545115 TWNKQ96RR1 684 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 BBS2Q9BXC9 721 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 NUSAP1Q9BXS6 441 aaKnown RBP14.9□□□□□ -0.02
DDX11-228ENST00000545115 NIF3L1Q9GZT8 377 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 CYP3A43Q9HB55 503 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.9□□□□□ -0.02
DDX11-228ENST00000545115 DNAJC17Q9NVM6 304 aaKnown RBP14.9□□□□□ -0.02
DDX11-228ENST00000545115 OSER1Q9NX31 292 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 MBD1Q9UIS9 605 aaPredicted RBP14.9□□□□□ -0.02
DDX11-228ENST00000545115 STARD13Q9Y3M8 1113 aa14.9□□□□□ -0.02
DDX11-228ENST00000545115 KMT2BQ9UMN6 2715 aaPredicted RBP14.89□□□□□ -0.03
DDX11-228ENST00000545115 TRIM24O15164 1050 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 AP5Z1O43299 807 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 CACNG3O60359 315 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 TRIM49P0CI25 452 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 TRIM49CP0CI26 452 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 KRT13P13646 458 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 HOXB2P14652 356 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 TYRP14679 529 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 GABRG2P18507 467 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 CSRP1P21291 193 aaKnown RBP14.89□□□□□ -0.03
DDX11-228ENST00000545115 NTSR1P30989 418 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 SYKP43405 635 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 GCLMP48507 274 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 KRT85P78386 507 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 ENPEPQ07075 957 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 SH3PXD2AQ5TCZ1 1133 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 LYSMD4Q5XG99 296 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 KLHDC10Q6PID8 442 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 TPGS1Q6ZTW0 290 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 TAS1R2Q8TE23 839 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 DNAI2Q9GZS0 605 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 APOBEC3GQ9HC16 384 aaKnown RBP14.89□□□□□ -0.03
DDX11-228ENST00000545115 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDX11-228ENST00000545115 MARK1Q9P0L2 795 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 WDR35Q9P2L0 1181 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 CHD8Q9HCK8 2581 aa14.89□□□□□ -0.03
DDX11-228ENST00000545115 PLXND1Q9Y4D7 1925 aa14.88□□□□□ -0.03
DDX11-228ENST00000545115 A0A1W2PQH9 124 aa14.88□□□□□ -0.03
DDX11-228ENST00000545115 GIPC1O14908 333 aa14.88□□□□□ -0.03
DDX11-228ENST00000545115 ZBTB24O43167 697 aaPredicted RBP14.88□□□□□ -0.03
DDX11-228ENST00000545115 CILPO75339 1184 aa14.88□□□□□ -0.03
DDX11-228ENST00000545115 PRR29P0C7W0 189 aa14.88□□□□□ -0.03
DDX11-228ENST00000545115 RARGP13631 454 aa14.88□□□□□ -0.03
DDX11-228ENST00000545115 CEACAM1P13688 526 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms