RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 ZNF516Q92618 1163 aa16.41■□□□□ 0.22
CD4-212ENST00000544344 BBC3Q96PG8 261 aaPredicted RBP16.41■□□□□ 0.22
CD4-212ENST00000544344 XYLT2Q9H1B5 865 aa16.41■□□□□ 0.22
CD4-212ENST00000544344 FAM124BQ9H5Z6 455 aaPredicted RBP16.41■□□□□ 0.22
CD4-212ENST00000544344 CCDC86Q9H6F5 360 aaKnown RBP16.41■□□□□ 0.22
CD4-212ENST00000544344 DNAJC17Q9NVM6 304 aaKnown RBP16.41■□□□□ 0.22
CD4-212ENST00000544344 GMIPQ9P107 970 aa16.41■□□□□ 0.22
CD4-212ENST00000544344 RAD54BQ9Y620 910 aa16.41■□□□□ 0.22
CD4-212ENST00000544344 BPTFQ12830 3046 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 A8MXQ7 604 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 STAU1O95793 577 aaKnown RBP16.4■□□□□ 0.22
CD4-212ENST00000544344 IRF1P10914 325 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 SLC5A3P53794 718 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 C8orf34Q49A92 452 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 NUDT18Q6ZVK8 323 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 HTR3DQ70Z44 454 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 FAM35AQ86V20 835 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 MDM1Q8TC05 714 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 P2RY11Q96G91 374 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 MARK1Q9P0L2 795 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 PCOLCE2Q9UKZ9 415 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 SMC3Q9UQE7 1217 aa16.4■□□□□ 0.22
CD4-212ENST00000544344 WASH3PC4AMC7 463 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 TGFB1I1O43294 461 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 CISD3P0C7P0 127 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 DLATP10515 647 aaKnown RBP16.39■□□□□ 0.21
CD4-212ENST00000544344 TYRP14679 529 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 MYL6P60660 151 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 SNRNP35Q16560 246 aaKnown RBP16.39■□□□□ 0.21
CD4-212ENST00000544344 RGL4Q8IZJ4 473 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 ZMIZ2Q8NF64 920 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 DNASE2BQ8WZ79 361 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 CGRRF1Q99675 332 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 KLF16Q9BXK1 252 aaPredicted RBP16.39■□□□□ 0.21
CD4-212ENST00000544344 PANK2Q9BZ23 570 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 KIAA1586Q9HCI6 787 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 CACNA2D2Q9NY47 1150 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 SUSD2Q9UGT4 822 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 PCDHB9Q9Y5E1 797 aa16.39■□□□□ 0.21
CD4-212ENST00000544344 HELZ2Q9BYK8 2649 aaKnown RBP16.39■□□□□ 0.21
CD4-212ENST00000544344 NEDD8-MDP1E9PL57 170 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 TBX18O95935 607 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 TNNI1P19237 187 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 STAT6P42226 847 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 TNNC1P63316 161 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 BNC1Q01954 994 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 PSMD6Q15008 389 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 SYCP2LQ5T4T6 812 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 SDE2Q6IQ49 451 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 EPM2AIP1Q7L775 607 aaPredicted RBP16.38■□□□□ 0.21
CD4-212ENST00000544344 FUKQ8N0W3 1084 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 RDH13Q8NBN7 331 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 BAHD1Q8TBE0 780 aaPredicted RBP16.38■□□□□ 0.21
CD4-212ENST00000544344 FOXJ1Q92949 421 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 BBS2Q9BXC9 721 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 ZDHHC5Q9C0B5 715 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 SMYD3Q9H7B4 428 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 IL21RQ9HBE5 538 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
CD4-212ENST00000544344 COMMD8Q9NX08 183 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 TOR4AQ9NXH8 423 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 KIAA1522Q9P206 1035 aaPredicted RBP16.38■□□□□ 0.21
CD4-212ENST00000544344 RAXQ9Y2V3 346 aa16.38■□□□□ 0.21
CD4-212ENST00000544344 URB1O60287 2271 aaKnown RBP16.38■□□□□ 0.21
CD4-212ENST00000544344 GFRA2O00451 464 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 TLR5O60602 858 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 NDUFS2O75306 463 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 BEST1O76090 585 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 DKK1O94907 266 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 GNSP15586 552 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 CD6P30203 668 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 CDH8P55286 799 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 CYP24A1Q07973 514 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 WDR45BQ5MNZ6 344 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 FAM173BQ6P4H8 233 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 TPGS1Q6ZTW0 290 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 METTL3Q86U44 580 aaKnown RBP16.37■□□□□ 0.21
CD4-212ENST00000544344 CCDC65Q8IXS2 484 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 HNRNPLLQ8WVV9 542 aaKnown RBP16.37■□□□□ 0.21
CD4-212ENST00000544344 CCDC127Q96BQ5 260 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 XPO6Q96QU8 1125 aaKnown RBP16.37■□□□□ 0.21
CD4-212ENST00000544344 SMOQ99835 787 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 SDCBP2Q9H190 292 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 AGPAT3Q9NRZ7 376 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 WSB2Q9NYS7 404 aaPredicted RBP16.37■□□□□ 0.21
CD4-212ENST00000544344 USP36Q9P275 1121 aaKnown RBP16.37■□□□□ 0.21
CD4-212ENST00000544344 NXF1Q9UBU9 619 aaKnown RBP16.37■□□□□ 0.21
CD4-212ENST00000544344 APOBEC2Q9Y235 224 aaKnown RBP16.37■□□□□ 0.21
CD4-212ENST00000544344 NFE2L3Q9Y4A8 694 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 KNL1Q8NG31 2342 aa16.37■□□□□ 0.21
CD4-212ENST00000544344 ASXL3Q9C0F0 2248 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 A0A1B0GTW7 788 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 KCNJ18B7U540 433 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 ZBTB24O43167 697 aaPredicted RBP16.36■□□□□ 0.21
CD4-212ENST00000544344 TXLNAP40222 546 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 FUT11Q495W5 492 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 KIAA1324Q6UXG2 1013 aaKnown RBP16.36■□□□□ 0.21
CD4-212ENST00000544344 DBX2Q6ZNG2 339 aa16.36■□□□□ 0.21
CD4-212ENST00000544344 TMPRSS7Q7RTY8 843 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms