RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 RAB6CQ9H0N0 254 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 STAP1Q9ULZ2 295 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 BRCA2P51587 3418 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 KIAA0355O15063 1070 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 DAPK3O43293 454 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 LIASO43766 372 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 ZBED1O96006 694 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 TIMP1P01033 207 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 GALTP07902 379 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 TFE3P19532 575 aaPredicted RBP9.73□□□□□ -0.85
GNE-206ENST00000543356 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
GNE-206ENST00000543356 SULT1E1P49888 294 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 LBX1P52954 281 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 LMNB2Q03252 620 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 DPYSL3Q14195 570 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 TRADDQ15628 312 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 NFE2Q16621 373 aaPredicted RBP9.73□□□□□ -0.85
GNE-206ENST00000543356 OTUD1Q5VV17 481 aaPredicted RBP9.73□□□□□ -0.85
GNE-206ENST00000543356 KAZNQ674X7 775 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 ZNF280DQ6N043 979 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 FUT10Q6P4F1 479 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.73□□□□□ -0.85
GNE-206ENST00000543356 BHLHA9Q7RTU4 235 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 PSTKQ8IV42 348 aaKnown RBP9.73□□□□□ -0.85
GNE-206ENST00000543356 MAP7D3Q8IWC1 876 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 MREGQ8N565 214 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 TTC13Q8NBP0 860 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 ATL2Q8NHH9 583 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 FAM149B1Q96BN6 582 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 SNRNP25Q9BV90 132 aaKnown RBP9.73□□□□□ -0.85
GNE-206ENST00000543356 ADAM33Q9BZ11 813 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 MED4Q9NPJ6 270 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 RRN3Q9NYV6 651 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 USP3Q9Y6I4 520 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 PLXNA3P51805 1871 aa9.73□□□□□ -0.85
GNE-206ENST00000543356 ABHD14A-ACY1A0A1B0GW23 586 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 DGKIO75912 1065 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 GAS8O95995 478 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 CD48P09326 243 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 KCNJ1P48048 391 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 CDH6P55285 790 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 KRT17Q04695 432 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 SNX1Q13596 522 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 SLC39A12Q504Y0 691 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 FAM171A1Q5VUB5 890 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 SND1Q7KZF4 910 aaKnown RBP eCLIP9.72□□□□□ -0.85
GNE-206ENST00000543356 BEND5Q7L4P6 421 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 NECAB2Q7Z6G3 386 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 SRLQ86TD4 932 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 NDRG1Q92597 394 aaKnown RBP9.72□□□□□ -0.85
GNE-206ENST00000543356 NKD2Q969F2 451 aaPredicted RBP9.72□□□□□ -0.85
GNE-206ENST00000543356 ZNF670Q9BS34 389 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 TRIM62Q9BVG3 475 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 DPH5Q9H2P9 285 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 NEU2Q9Y3R4 380 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 YJEFN3A6XGL0 299 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 E7ENQ6 273 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 KIF1CO43896 1103 aaKnown RBP9.72□□□□□ -0.85
GNE-206ENST00000543356 EFCAB14O75071 495 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 EFEMP2O95967 443 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 LTFP02788 710 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 USP17L7P0C7H9 530 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 RDXP35241 583 aaKnown RBP9.72□□□□□ -0.85
GNE-206ENST00000543356 MAGEA11P43364 429 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 BCAR1P56945 870 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 HLTFQ14527 1009 aaKnown RBP eCLIP9.72□□□□□ -0.85
GNE-206ENST00000543356 KRT81Q14533 505 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 PPP1R7Q15435 360 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 DPYSL2Q16555 572 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 CTXN3Q4LDR2 81 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 DCAF6Q58WW2 860 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 ERMARDQ5T6L9 678 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 SCYL2Q6P3W7 929 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 VSTM1Q6UX27 236 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 DDX42Q86XP3 938 aaKnown RBP eCLIP9.72□□□□□ -0.85
GNE-206ENST00000543356 FAF2Q96CS3 445 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 CALN1Q9BXU9 219 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 GPR62Q9BZJ7 368 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 ACBD3Q9H3P7 528 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 PCDH18Q9HCL0 1135 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 ZDHHC18Q9NUE0 388 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 HCSTQ9UBK5 93 aa9.72□□□□□ -0.85
GNE-206ENST00000543356 DRG1Q9Y295 367 aaKnown RBP9.72□□□□□ -0.85
GNE-206ENST00000543356 H7C4K7 107 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 APOC4-APOC2K7ER74 178 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 TBC1D4O60343 1298 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 CST8O60676 142 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 APOC2P02655 101 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 FYNP06241 537 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 ITGAVP06756 1048 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 OR4Q2P0C623 313 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 RPL21P46778 160 aaKnown RBP9.71□□□□□ -0.85
GNE-206ENST00000543356 RABGGTBP53611 331 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 AIF1P55008 147 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 VCPP55072 806 aaKnown RBP9.71□□□□□ -0.85
GNE-206ENST00000543356 BYSLQ13895 437 aaKnown RBP9.71□□□□□ -0.85
GNE-206ENST00000543356 TFDP2Q14188 446 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 OASLQ15646 514 aaKnown RBP9.71□□□□□ -0.85
GNE-206ENST00000543356 HFE2Q6ZVN8 426 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 RFX6Q8HWS3 928 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms