RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.1□□□□□ -1.59
MDM2-228ENST00000542502 ERICH2A1L162 156 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 DDTLA6NHG4 134 aaPredicted RBP5.1□□□□□ -1.59
MDM2-228ENST00000542502 MANSC4A6NHS7 340 aaPredicted RBP5.1□□□□□ -1.59
MDM2-228ENST00000542502 LRRC3CA6NJW4 275 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 KRTAP29-1A8MX34 341 aaPredicted RBP5.1□□□□□ -1.59
MDM2-228ENST00000542502 ORC4O43929 436 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 ASTN2O75129 1339 aaPredicted RBP5.1□□□□□ -1.59
MDM2-228ENST00000542502 PROP1O75360 226 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 KATNA1O75449 491 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 GPANK1O95872 356 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 POMCP01189 267 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 CETPP11597 493 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 GCSHP23434 173 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 PSMA5P28066 241 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 TMPRSS15P98073 1019 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 CDK17Q00537 523 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 MAP2K1Q02750 393 aaPredicted RBP5.1□□□□□ -1.59
MDM2-228ENST00000542502 GABPAQ06546 454 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 PPIL2Q13356 520 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 SNAPC2Q13487 334 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 UBXN2BQ14CS0 331 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 ABCB5Q2M3G0 1257 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 AFMIDQ63HM1 303 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 CTR9Q6PD62 1173 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 FAM180AQ6UWF9 173 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 IQCA1Q86XH1 822 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 SCYL3Q8IZE3 742 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 FBXO18Q8NFZ0 1043 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.1□□□□□ -1.59
MDM2-228ENST00000542502 ACTRT2Q8TDY3 377 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 SDR42E1Q8WUS8 393 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 MAP4K1Q92918 833 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 NACC2Q96BF6 587 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 CHMP4CQ96CF2 233 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 METTL14Q9HCE5 456 aaKnown RBP5.1□□□□□ -1.59
MDM2-228ENST00000542502 DDX4Q9NQI0 724 aaKnown RBP5.1□□□□□ -1.59
MDM2-228ENST00000542502 MOCS1Q9NZB8 636 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 SLC17A6Q9P2U8 582 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 PNMA2Q9UL42 364 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 PCDHAC2Q9Y5I4 1007 aa5.1□□□□□ -1.59
MDM2-228ENST00000542502 DOCK1Q14185 1865 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 LAMA4Q16363 1823 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 DDX60LQ5H9U9 1706 aaKnown RBP5.09□□□□□ -1.59
MDM2-228ENST00000542502 WDR19Q8NEZ3 1342 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 CCDC78A2IDD5 438 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 TSPY2A6NKD2 308 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 UBE2Q2LH0YL09 131 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 S100BP04271 92 aaPredicted RBP5.09□□□□□ -1.59
MDM2-228ENST00000542502 TSPY3P0CV98 308 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 TSPY8P0CW00 308 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 RAP2AP10114 183 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 ITGB6P18564 788 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 SREBF1P36956 1147 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 PLCD1P51178 756 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 HSD11B2P80365 405 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 TRAF1Q13077 416 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 MTMR1Q13613 665 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 ARHGEF6Q15052 776 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 CYP2A13Q16696 494 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 AKNAD1Q5T1N1 836 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 MIGA2Q7L4E1 593 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 NCOA7Q8NI08 942 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 COG1Q8WTW3 980 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 TSPEARQ8WU66 669 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 LPAR1Q92633 364 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 PTCD3Q96EY7 689 aaKnown RBP5.09□□□□□ -1.59
MDM2-228ENST00000542502 UHRF1Q96T88 793 aaPredicted RBP5.09□□□□□ -1.59
MDM2-228ENST00000542502 SEC62Q99442 399 aaKnown RBP5.09□□□□□ -1.59
MDM2-228ENST00000542502 ASPSCR1Q9BZE9 553 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 KLK15Q9H2R5 256 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 TCP11L1Q9NUJ3 509 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 TMOD4Q9NZQ9 345 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 SAP30BPQ9UHR5 308 aaKnown RBP5.09□□□□□ -1.59
MDM2-228ENST00000542502 DMTF1Q9Y222 760 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 SIK3Q9Y2K2 1263 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 SLC45A1Q9Y2W3 748 aa5.09□□□□□ -1.59
MDM2-228ENST00000542502 ATAD5Q96QE3 1844 aa5.09□□□□□ -1.6
MDM2-228ENST00000542502 PLIN4Q96Q06 1357 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 MPHOSPH10O00566 681 aaKnown RBP5.08□□□□□ -1.6
MDM2-228ENST00000542502 PRKAB2O43741 272 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 TTLL1O95922 423 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 GUCY1A2P33402 732 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 MCM5P33992 734 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 SHMT1P34896 483 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 TM4SF4P48230 202 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 BACE1P56817 501 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 SESN3P58005 492 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 MRPS9P82933 396 aaKnown RBP5.08□□□□□ -1.6
MDM2-228ENST00000542502 VGLL4Q14135 290 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 PPP2R5BQ15173 497 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 NECTIN1Q15223 517 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 ODR4Q5SWX8 454 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 FOXR2Q6PJQ5 311 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 MICALCLQ6ZW33 695 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 ZNF589Q86UQ0 364 aaPredicted RBP5.08□□□□□ -1.6
MDM2-228ENST00000542502 DGKHQ86XP1 1220 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 PQLC1Q8N2U9 271 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 LNX2Q8N448 690 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 CLRN3Q8NCR9 226 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms