RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 A1BGP04217 495 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 CENPBP07199 599 aaPredicted RBP4.3□□□□□ -1.72
LEMD3-204ENST00000542032 HGFP14210 728 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 PHKG2P15735 406 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 IL1R2P27930 398 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 MCM5P33992 734 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 GATMP50440 423 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 LARS2Q15031 903 aaKnown RBP4.3□□□□□ -1.72
LEMD3-204ENST00000542032 RALBP1Q15311 655 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 ETFDHQ16134 617 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 CERKLQ49MI3 558 aaPredicted RBP4.3□□□□□ -1.72
LEMD3-204ENST00000542032 PLAG1Q6DJT9 500 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 CCSAPQ6IQ19 270 aaPredicted RBP4.3□□□□□ -1.72
LEMD3-204ENST00000542032 USP49Q70CQ1 688 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 C11orf96Q7Z7L8 435 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 YAF2Q8IY57 180 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 KRT78Q8N1N4 520 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 METTL25Q8N6Q8 603 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 ZDHHC12Q96GR4 267 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 ZNF48Q96MX3 618 aaPredicted RBP4.3□□□□□ -1.72
LEMD3-204ENST00000542032 ZNF287Q9HBT7 754 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 PRDM11Q9NQV5 511 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 DDX21Q9NR30 783 aaKnown RBP eCLIP4.3□□□□□ -1.72
LEMD3-204ENST00000542032 TFCP2L1Q9NZI6 479 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 LPAR3Q9UBY5 353 aa4.3□□□□□ -1.72
LEMD3-204ENST00000542032 A0A0U1RQG5 324 aaPredicted RBP4.29□□□□□ -1.72
LEMD3-204ENST00000542032 HMGB1P1B2RPK0 211 aaPredicted RBP4.29□□□□□ -1.72
LEMD3-204ENST00000542032 F8W8V4 182 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 RAB27BO00194 218 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 EXOC5O00471 708 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 RGS10O43665 173 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 TMPRSS11DO60235 418 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 MGEA5O60502 916 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 CAND2O75155 1236 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 LDHAP00338 332 aaKnown RBP4.29□□□□□ -1.72
LEMD3-204ENST00000542032 MT-ND5P03915 603 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 ATP5F1P24539 256 aaPredicted RBP4.29□□□□□ -1.72
LEMD3-204ENST00000542032 PTGER1P34995 402 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 CARSP49589 748 aaKnown RBP4.29□□□□□ -1.72
LEMD3-204ENST00000542032 PGDP52209 483 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 CFHR3Q02985 330 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 FHL3Q13643 280 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 MANEALQ5VSG8 457 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 SLC2A7Q6PXP3 512 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 SERPINA13PQ6UXR4 307 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 UNC13DQ70J99 1090 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 C9orf106Q8NAJ2 232 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 PHKBQ93100 1093 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 EDC3Q96F86 508 aaKnown RBP4.29□□□□□ -1.72
LEMD3-204ENST00000542032 STRBPQ96SI9 672 aaKnown RBP4.29□□□□□ -1.72
LEMD3-204ENST00000542032 MPHOSPH6Q99547 160 aaKnown RBP4.29□□□□□ -1.72
LEMD3-204ENST00000542032 TMEM79Q9BSE2 394 aa4.29□□□□□ -1.72
LEMD3-204ENST00000542032 COL15A1P39059 1388 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 PPEF2O14830 753 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 INMTO95050 263 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 CREB1P16220 341 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 TPH1P17752 444 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 ATF3P18847 181 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 HTR7P34969 479 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 COPAP53621 1224 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 SETQ01105 290 aaPredicted RBP4.28□□□□□ -1.72
LEMD3-204ENST00000542032 CLCA4Q14CN2 919 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 TRIP6Q15654 476 aaKnown RBP4.28□□□□□ -1.72
LEMD3-204ENST00000542032 DENND2CQ68D51 928 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 IGFBPL1Q8WX77 278 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 COQ8BQ96D53 544 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 SNX22Q96L94 193 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 CCDC17Q96LX7 622 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 FAM227BQ96M60 508 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 ARPC5LQ9BPX5 153 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 FAM118BQ9BPY3 351 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 EFHD1Q9BUP0 239 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 UNKQ9C0B0 810 aaKnown RBP4.28□□□□□ -1.72
LEMD3-204ENST00000542032 SNX15Q9NRS6 342 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 TUBA8Q9NY65 449 aaPredicted RBP4.28□□□□□ -1.72
LEMD3-204ENST00000542032 SEMA5BQ9P283 1151 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 MGAT4CQ9UBM8 478 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 NKX1-2Q9UD57 310 aaPredicted RBP4.28□□□□□ -1.72
LEMD3-204ENST00000542032 HDAC9Q9UKV0 1011 aa4.28□□□□□ -1.72
LEMD3-204ENST00000542032 KCNU1A8MYU2 1149 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 TMEM232C9JQI7 657 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 IKBKBO14920 756 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 KRT18P05783 430 aaKnown RBP4.27□□□□□ -1.73
LEMD3-204ENST00000542032 CD19P15391 556 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 THBS4P35443 961 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 ARHGAP25P42331 645 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 MTHFSP49914 203 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 ITGA8P53708 1063 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 DEUP1Q05D60 604 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 SEC23BQ15437 767 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 MIS18BP1Q6P0N0 1132 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 MZT2AQ6P582 158 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 KRT73Q86Y46 540 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 LIX1LQ8IVB5 337 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 SDR16C5Q8N3Y7 309 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 C12orf76Q8N812 135 aaPredicted RBP4.27□□□□□ -1.73
LEMD3-204ENST00000542032 PNPLA1Q8N8W4 532 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 DENND1AQ8TEH3 1009 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 PIGOQ8TEQ8 1089 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 SMCR8Q8TEV9 937 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms