RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ANKRD52Q8NB46 1076 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 SLC35G2Q8TBE7 412 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 GIPC2Q8TF65 315 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 VCPIP1Q96JH7 1222 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 CALR3Q96L12 384 aaKnown RBP11.14□□□□□ -0.63
ATL3-204ENST00000540699 ALS2CR12Q96Q35 445 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 KCNK16Q96T55 309 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 CORO1BQ9BR76 489 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 MED10Q9BTT4 135 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 UBXN6Q9BZV1 441 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 LHX5Q9H2C1 402 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 OSGEPQ9NPF4 335 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 COMMD8Q9NX08 183 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.14□□□□□ -0.63
ATL3-204ENST00000540699 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.14□□□□□ -0.63
ATL3-204ENST00000540699 JRKLQ9Y4A0 524 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 ZFP37Q9Y6Q3 630 aaPredicted RBP11.14□□□□□ -0.63
ATL3-204ENST00000540699 CACNA1HO95180 2353 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 KIF26AQ9ULI4 1882 aaPredicted RBP11.14□□□□□ -0.63
ATL3-204ENST00000540699 VPS13AQ96RL7 3174 aa11.14□□□□□ -0.63
ATL3-204ENST00000540699 CFAP54Q96N23 3096 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 TMEM221A6NGB7 291 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 SOBPA7XYQ1 873 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 M0R296 226 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 MED7O43513 233 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 F11P03951 625 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 ATP1A1P05023 1023 aaKnown RBP11.13□□□□□ -0.63
ATL3-204ENST00000540699 MYBL1P10243 752 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 CD19P15391 556 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 MMP8P22894 467 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 ADORA2BP29275 332 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 NSFP46459 744 aaKnown RBP11.13□□□□□ -0.63
ATL3-204ENST00000540699 ZXDAP98168 799 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 MTMR3Q13615 1198 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 IFI16Q16666 785 aaKnown RBP11.13□□□□□ -0.63
ATL3-204ENST00000540699 CYP4A22Q5TCH4 519 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 DENND1BQ6P3S1 775 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 POTEHQ6S545 545 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 TRIM67Q6ZTA4 783 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 DENND5BQ6ZUT9 1274 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 GAREM2Q75VX8 874 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 PDZD4Q76G19 769 aaPredicted RBP11.13□□□□□ -0.63
ATL3-204ENST00000540699 OTOP3Q7RTS5 596 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 TMEM150AQ86TG1 271 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 NPAS3Q8IXF0 933 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 ZDHHC14Q8IZN3 488 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 NUP93Q8N1F7 819 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 TMEM35BQ8NCS4 154 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 C1orf131Q8NDD1 294 aaKnown RBP11.13□□□□□ -0.63
ATL3-204ENST00000540699 ITFG1Q8TB96 612 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 SHKBP1Q8TBC3 707 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 GPR152Q8TDT2 470 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 CPA5Q8WXQ8 436 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 ZNF653Q96CK0 615 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 TRIM11Q96F44 468 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 MYADMQ96S97 322 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 PRRX2Q99811 253 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 PDCL3Q9H2J4 239 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 EHD2Q9NZN4 543 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 UVRAGQ9P2Y5 699 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 EPS15L1Q9UBC2 864 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 UXTQ9UBK9 157 aaPredicted RBP11.13□□□□□ -0.63
ATL3-204ENST00000540699 CYTH4Q9UIA0 394 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 TSPAN16Q9UKR8 245 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 MRPS23Q9Y3D9 190 aaKnown RBP11.13□□□□□ -0.63
ATL3-204ENST00000540699 NR2E1Q9Y466 385 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 MRFAP1Q9Y605 127 aa11.13□□□□□ -0.63
ATL3-204ENST00000540699 TCRBV5S1A1TA0A578 114 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 FAM170AA1A519 330 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 ENC1O14682 589 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
ATL3-204ENST00000540699 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
ATL3-204ENST00000540699 BUB1BO60566 1050 aaPredicted RBP11.12□□□□□ -0.63
ATL3-204ENST00000540699 TADA3O75528 432 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 URI1O94763 535 aaPredicted RBP11.12□□□□□ -0.63
ATL3-204ENST00000540699 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
ATL3-204ENST00000540699 SETSIPP0DME0 302 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 CEBPBP17676 345 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 RRM1P23921 792 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 GABRR2P28476 465 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 WEE1P30291 646 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 CDC25CP30307 473 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 BCAT1P54687 386 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 GSCP56915 257 aaPredicted RBP11.12□□□□□ -0.63
ATL3-204ENST00000540699 MAP3K7CLP57077 242 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 USP46P62068 366 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 BST2Q10589 180 aaKnown RBP11.12□□□□□ -0.63
ATL3-204ENST00000540699 TUBB2AQ13885 445 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 GOLGA7BQ2TAP0 167 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 PTPN20Q4JDL3 420 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 MEI1Q5TIA1 1274 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 STKLD1Q8NE28 680 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 OVCA2Q8WZ82 227 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 FGF13Q92913 245 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 TCEAL4Q96EI5 215 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 RPGRIP1Q96KN7 1286 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 C11orf70Q9BRQ4 267 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 TUBB2BQ9BVA1 445 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 TLR10Q9BXR5 811 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 GDE1Q9NZC3 331 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms