RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 SLC5A9Q2M3M2 681 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 PPM1LQ5SGD2 360 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 IFIT1BQ5T764 474 aaKnown RBP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 FAM160B1Q5W0V3 765 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 TWF2Q6IBS0 349 aaKnown RBP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 SWSAP1Q6NVH7 229 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 VHLLQ6RSH7 139 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 TRMT1LQ7Z2T5 733 aaKnown RBP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF589Q86UQ0 364 aaPredicted RBP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 GGNQ86UU5 652 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 GPR65Q8IYL9 337 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 CARFQ8N187 725 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 LRRC71Q8N4P6 559 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 URGCPQ8TCY9 931 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 PLEKHO2Q8TD55 490 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 PIBF1Q8WXW3 757 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 PGBD4Q96DM1 585 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 FAM227BQ96M60 508 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 FAM193BQ96PV7 902 aaPredicted RBP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 MAP7D2Q96T17 732 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 MXRA8Q9BRK3 442 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 TRMT61BQ9BVS5 477 aaKnown RBP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 LGR4Q9BXB1 951 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 TMEM9BQ9NQ34 198 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF302Q9NR11 478 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 HELLSQ9NRZ9 838 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 KCNH7Q9NS40 1196 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 GDE1Q9NZC3 331 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 KIAA1522Q9P206 1035 aaPredicted RBP4.37□□□□□ -1.71
C2CD3-214ENST00000540057 DUSP10Q9Y6W6 482 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 TTC41PQ6P2S7 1318 aa4.37□□□□□ -1.71
C2CD3-214ENST00000540057 ATG2BQ96BY7 2078 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 TRBV23OR9-2A0A075B6M9 112 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 A0A087WZ62 844 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 A0A0D9SFI3 127 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PATE3B3GLJ2 98 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 J3QKU1 62 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 DDX39AO00148 427 aaKnown RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 ARNTLO00327 626 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF213O14771 459 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 ARHGAP6O43182 974 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 EXTL3O43909 919 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 NPHS1O60500 1241 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 AKAP3O75969 853 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 KCNH1O95259 989 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 NTRK1P04629 796 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 RHOP08100 348 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 POU2F2P09086 479 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PLS3P13797 630 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 CEBPBP17676 345 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 TMOD1P28289 359 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 GDI1P31150 447 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 RAB27AP51159 221 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 MLLT6P55198 1093 aaPredicted RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 SIM1P81133 766 aaPredicted RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 CREB5Q02930 508 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 DSC1Q08554 894 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 SCRN1Q12765 414 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 DRP2Q13474 957 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 SLC9A5Q14940 896 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PPP2R5EQ16537 467 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 UBE2SQ16763 222 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 UAP1L1Q3KQV9 507 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 USP41Q3LFD5 358 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 MCMDC2Q4G0Z9 681 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PABPC1LQ4VXU2 614 aaKnown RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 FAM78AQ5JUQ0 283 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 LIN9Q5TKA1 542 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 ERICH6BQ5W0A0 696 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 FUT10Q6P4F1 479 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PKN3Q6P5Z2 889 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PRSS55Q6UWB4 352 aaPredicted RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 VITQ6UXI7 678 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 MRPL10Q7Z7H8 261 aaKnown RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PIP4P1Q86T03 277 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 CKAP2LQ8IYA6 745 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF843Q8N446 348 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 LINC00482Q8N8I6 264 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 SLC7A14Q8TBB6 771 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 MDM1Q8TC05 714 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 OTUD7AQ8TE49 926 aaPredicted RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 MRGPRX3Q96LB0 322 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 SCLT1Q96NL6 688 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 SYT3Q9BQG1 590 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 CLSTN3Q9BQT9 956 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 FDXACB1Q9BRP7 624 aaPredicted RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 GCOM2Q9BZD3 368 aaPredicted RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 SLC32A1Q9H598 525 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 RSAD1Q9HA92 442 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 LY9Q9HBG7 655 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 AGO4Q9HCK5 861 aaKnown RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 ZFP14Q9HCL3 533 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 NUDT5Q9UKK9 219 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PCDHA6Q9UN73 950 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PIN4Q9Y237 131 aaKnown RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 MRPS23Q9Y3D9 190 aaKnown RBP4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PCDHB2Q9Y5E7 798 aa4.36□□□□□ -1.71
C2CD3-214ENST00000540057 PCDHA8Q9Y5H6 950 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms