RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SEC31AO94979 1220 aaKnown RBP17.61■□□□□ 0.41
COPS3-212ENST00000539941 ZBED1O96006 694 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 AMHP03971 560 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 HDAC4P56524 1084 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 BCAR1P56945 870 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 PDK2Q15119 407 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 SMTNL2Q2TAL5 461 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 MFSD5Q6N075 450 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 TTC27Q6P3X3 843 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 DRICH1Q6PGQ1 229 aaPredicted RBP17.61■□□□□ 0.41
COPS3-212ENST00000539941 SYDE1Q6ZW31 735 aaPredicted RBP17.61■□□□□ 0.41
COPS3-212ENST00000539941 ANKS1BQ7Z6G8 1248 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 JAMLQ86YT9 394 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 MAP7D3Q8IWC1 876 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 CCDC105Q8IYK2 499 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 DEFB106AQ8N104 65 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 TMEM199Q8N511 208 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 KCTD6Q8NC69 237 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 FAM71BQ8TC56 605 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 CASKIN2Q8WXE0 1202 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 TOP1MTQ969P6 601 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 NT5C3BQ969T7 300 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 GPR62Q9BZJ7 368 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 FAM114A2Q9NRY5 505 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 ALPK3Q96L96 1907 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 TRIM43BA6NCK2 446 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 ZNF487B1APH4 448 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 MYBL2P10244 700 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 RAG1P15918 1043 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 GBP1P32455 592 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 NDUFV1P49821 464 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 GYS2P54840 703 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 DRG2P55039 364 aaKnown RBP17.61■□□□□ 0.41
COPS3-212ENST00000539941 SMARCB1Q12824 385 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 NNTQ13423 1086 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 CTXN3Q4LDR2 81 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 KCNT1Q5JUK3 1230 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 PM20D1Q6GTS8 502 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 VSTM1Q6UX27 236 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 BBS12Q6ZW61 710 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 GPRIN1Q7Z2K8 1008 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 TRIM43Q96BQ3 446 aaPredicted RBP17.61■□□□□ 0.41
COPS3-212ENST00000539941 ACSF2Q96CM8 615 aaPredicted RBP17.61■□□□□ 0.41
COPS3-212ENST00000539941 ERP44Q9BS26 406 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 RHOBTB2Q9BYZ6 727 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 USP3Q9Y6I4 520 aa17.61■□□□□ 0.41
COPS3-212ENST00000539941 ZSCAN5CA6NGD5 496 aaPredicted RBP17.6■□□□□ 0.41
COPS3-212ENST00000539941 BAIAP3O94812 1187 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 ECEL1O95672 775 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 KRT10P13645 584 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 MAGEA11P43364 429 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 ALDH7A1P49419 539 aaKnown RBP17.6■□□□□ 0.41
COPS3-212ENST00000539941 ARSEP51690 589 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 LLGL1Q15334 1064 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 SLC39A12Q504Y0 691 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 HSP90B2PQ58FF3 399 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 ANKS3Q6ZW76 656 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 BEND5Q7L4P6 421 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 BNIPLQ7Z465 357 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 PSTKQ8IV42 348 aaKnown RBP17.6■□□□□ 0.41
COPS3-212ENST00000539941 C7orf61Q8IZ16 206 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 TTC13Q8NBP0 860 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 C1orf54Q8WWF1 131 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 HSPH1Q92598 858 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 NPY6RQ99463 290 aa17.6■□□□□ 0.41
COPS3-212ENST00000539941 PRDM5Q9NQX1 630 aaPredicted RBP17.6■□□□□ 0.41
COPS3-212ENST00000539941 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.6■□□□□ 0.41
COPS3-212ENST00000539941 UPP2O95045 317 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 LTFP02788 710 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 CARSP49589 748 aaKnown RBP17.59■□□□□ 0.41
COPS3-212ENST00000539941 SULT1E1P49888 294 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 LMNB2Q03252 620 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 DCAF6Q58WW2 860 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 KAZNQ674X7 775 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 DUPD1Q68J44 220 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 SCYL2Q6P3W7 929 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 CEP57Q86XR8 500 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 ATL2Q8NHH9 583 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 CXorf56Q9H5V9 222 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 CWH43Q9H720 699 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 CHST7Q9NS84 486 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 HCSTQ9UBK5 93 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 PCDHB5Q9Y5E4 795 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 COL4A4P53420 1690 aaPredicted RBP17.59■□□□□ 0.41
COPS3-212ENST00000539941 COL4A6Q14031 1691 aa17.59■□□□□ 0.41
COPS3-212ENST00000539941 TRIOBPQ9H2D6 2365 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 ESYT3A0FGR9 886 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 YJEFN3A6XGL0 299 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 E7ENQ6 273 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 TBC1D4O60343 1298 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 EFEMP2O95967 443 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 GAS8O95995 478 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 USP17L7P0C7H9 530 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 CSF2RAP15509 400 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 ITGB8P26012 769 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 CALRP27797 417 aaKnown RBP17.58■□□□□ 0.41
COPS3-212ENST00000539941 GRIK1P39086 918 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 CDH6P55285 790 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 ERMARDQ5T6L9 678 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 IFT81Q8WYA0 676 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms