RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 LRMPQ12912 555 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 DMC1Q14565 340 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 C2orf27AQ580R0 203 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 BHLHA9Q7RTU4 235 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 PIGZQ86VD9 579 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 GAB3Q8WWW8 586 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 MED15Q96RN5 788 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 PNKPQ96T60 521 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 RNF225M0QZC1 329 aaPredicted RBP17.65■□□□□ 0.42
DDB1-215ENST00000539712 KAT7O95251 611 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 RETP07949 1114 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 HNRNPLP14866 589 aaKnown RBP eCLIP17.65■□□□□ 0.426e-6■■■□□ 18.9
DDB1-215ENST00000539712 KIR2DL1P43626 348 aaPredicted RBP17.65■□□□□ 0.42
DDB1-215ENST00000539712 SEC13P55735 322 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 STX17P56962 302 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 EMC10Q5UCC4 262 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 Q6ZNB5 142 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 TRIM59Q8IWR1 403 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 FAM160A2Q8N612 972 aaPredicted RBP17.65■□□□□ 0.42
DDB1-215ENST00000539712 KAT5Q92993 513 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 ZSWIM1Q9BR11 485 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 NACA2Q9H009 215 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 SPHK2Q9NRA0 654 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 DLL3Q9NYJ7 618 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 CLIC5Q9NZA1 410 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 EBF1Q9UH73 591 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 NAGPAQ9UK23 515 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 HCN2Q9UL51 889 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 CTNND2Q9UQB3 1225 aa17.65■□□□□ 0.42
DDB1-215ENST00000539712 TRIM24O15164 1050 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 TULP3O75386 442 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 GABBR2O75899 941 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 KLKB1P03952 638 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 PSEN1P49768 467 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 MARSP56192 900 aaKnown RBP17.64■□□□□ 0.41
DDB1-215ENST00000539712 GAD2Q05329 585 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 PDE4CQ08493 712 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 SPEM2Q0P670 501 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 GOLGA7BQ2TAP0 167 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 PKDCCQ504Y2 493 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 PM20D1Q6GTS8 502 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 CCDC33Q8N5R6 958 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 GPR161Q8N6U8 529 aaKnown RBP17.64■□□□□ 0.41
DDB1-215ENST00000539712 NAT16Q8N8M0 369 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 TFAP2BQ92481 460 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 NDRG1Q92597 394 aaKnown RBP17.64■□□□□ 0.41
DDB1-215ENST00000539712 SECISBP2LQ93073 1101 aaKnown RBP17.64■□□□□ 0.41
DDB1-215ENST00000539712 ACDQ96AP0 544 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 DNAI2Q9GZS0 605 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 ARHGEF4Q9NR80 690 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 DNMT3LQ9UJW3 386 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 GMEB2Q9UKD1 530 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 TSPAN16Q9UKR8 245 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 RAB23Q9ULC3 237 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 SPAG17Q6Q759 2223 aa17.64■□□□□ 0.41
DDB1-215ENST00000539712 MYO18AQ92614 2054 aaKnown RBP17.63■□□□□ 0.41
DDB1-215ENST00000539712 O00370 1275 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 AXIN1O15169 862 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 RPP40O75818 363 aaKnown RBP17.63■□□□□ 0.41
DDB1-215ENST00000539712 STC2O76061 302 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 APBB3O95704 486 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 GRIA2P42262 883 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 TNFRSF4P43489 277 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 PLA2G4AP47712 749 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 UBE2HP62256 183 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 MRPS21P82921 87 aaKnown RBP17.63■□□□□ 0.41
DDB1-215ENST00000539712 CCDC40Q4G0X9 1142 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 C10orf120Q5SQS8 335 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 TMEM92Q6UXU6 159 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 KBTBD6Q86V97 674 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 IL17RCQ8NAC3 791 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 CCDC26Q8TAB7 109 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 KIAA1468Q9P260 1216 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 MMP17Q9ULZ9 603 aa17.63■□□□□ 0.41
DDB1-215ENST00000539712 BICDL2A1A5D9 508 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 SGK1O00141 431 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 XPO1O14980 1071 aaKnown RBP17.62■□□□□ 0.41
DDB1-215ENST00000539712 P4HA2O15460 535 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 ADAM23O75077 832 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 APODP05090 189 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 TBXAS1P24557 533 aaPredicted RBP17.62■□□□□ 0.41
DDB1-215ENST00000539712 TKTL1P51854 596 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 KDSRQ06136 332 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 PAK1Q13153 545 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 CRY1Q16526 586 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 CAMK4Q16566 473 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 RSPO4Q2I0M5 234 aaPredicted RBP17.62■□□□□ 0.41
DDB1-215ENST00000539712 SGO2Q562F6 1265 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 CEP68Q76N32 757 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 RASSF3Q86WH2 238 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 ARHGEF19Q8IW93 802 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 ALLCQ8N6M5 410 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 EHBP1Q8NDI1 1231 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 UBA3Q8TBC4 463 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 ZC3H10Q96K80 434 aaKnown RBP17.62■□□□□ 0.41
DDB1-215ENST00000539712 SRRTQ9BXP5 876 aaKnown RBP17.62■□□□□ 0.41
DDB1-215ENST00000539712 ZDHHC4Q9NPG8 344 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 CHMP5Q9NZZ3 219 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 MARK1Q9P0L2 795 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 KIAA1257Q9ULG3 409 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms