RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PLXNB3Q9ULL4 1909 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 A0A1W2PQD8 194 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 FAM221BA6H8Z2 402 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 NDUFS2O75306 463 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 ZNF217O75362 1048 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 TRPC3Q13507 836 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 SDE2Q6IQ49 451 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 KIAA1324Q6UXG2 1013 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 NAXDQ8IW45 347 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 BBS2Q9BXC9 721 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 TRIM9Q9C026 710 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 SMYD3Q9H7B4 428 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 KRT82Q9NSB4 513 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 APC2O95996 2303 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 IGSF10Q6WRI0 2623 aa14.84□□□□□ -0.03
SMARCA4-206ENST00000538456 CLIC2O15247 247 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 CAPNS1P04632 268 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 FTH1P19P0C7X4 201 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 TYRP14679 529 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 MAOBP27338 520 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 PGFP49763 221 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 TUBP50607 506 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 CYP24A1Q07973 514 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 HNRNPDQ14103 355 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 PSMD6Q15008 389 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 SCARA5Q6ZMJ2 495 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 TPGS1Q6ZTW0 290 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 TOGARAM2Q6ZUX3 1019 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 SCFD1Q8WVM8 642 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 BHMTQ93088 406 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 ELMO3Q96BJ8 720 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 CD248Q9HCU0 757 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 DMAP1Q9NPF5 467 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 AGPAT3Q9NRZ7 376 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 CACNA2D2Q9NY47 1150 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 STARD13Q9Y3M8 1113 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 GPSM3Q9Y4H4 160 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 PTPRBP23467 1997 aa14.83□□□□□ -0.04
SMARCA4-206ENST00000538456 PRRT4C9JH25 899 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 CACNG3O60359 315 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 TLR5O60602 858 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 PHACTR2O75167 634 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 GJB3O75712 270 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 AP1G2O75843 785 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 TBX18O95935 607 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 CDH8P55286 799 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 GRIK2Q13002 908 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 SLC14A1Q13336 389 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 SYCP2LQ5T4T6 812 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 SNX30Q5VWJ9 437 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 NELFCDQ8IXH7 590 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 ZNF516Q92618 1163 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 SMARCD1Q96GM5 515 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 MRGPRX1Q96LB2 322 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 XPO6Q96QU8 1125 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 GABRG3Q99928 467 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 XYLT2Q9H1B5 865 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 FAM124BQ9H5Z6 455 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 SUSD2Q9UGT4 822 aa14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 GCN1Q92616 2671 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-206ENST00000538456 MEI4A8MW99 385 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 WASH3PC4AMC7 463 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 EIF3DO15371 548 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 TGFB1I1O43294 461 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 FAM163BP0C2L3 166 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 ZDHHC11BP0C7U3 371 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 CCDC130P13994 396 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 GNSP15586 552 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 CASP4P49662 377 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 ASIC1P78348 528 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 ORC1Q13415 861 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 COL28A1Q2UY09 1125 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 ZNF699Q32M78 642 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 PAQR9Q6ZVX9 377 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 ACOT1Q86TX2 421 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 PDZD3Q86UT5 571 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 FUKQ8N0W3 1084 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 ADAMTS14Q8WXS8 1223 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 SYAP1Q96A49 352 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 ZNF419Q96HQ0 510 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 DUSP9Q99956 384 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 GZF1Q9H116 711 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 CCDC86Q9H6F5 360 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 IL37Q9NZH6 218 aa14.81□□□□□ -0.04
SMARCA4-206ENST00000538456 GREM1O60565 184 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 BEST1O76090 585 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 STAU1O95793 577 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 ATICP31939 592 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 DGKGP49619 791 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 BIRC3Q13489 604 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 WDR45BQ5MNZ6 344 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 FAM26FQ5R3K3 315 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 HTR3DQ70Z44 454 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 EPM2AIP1Q7L775 607 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 ZCCHC9Q8N567 271 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 XXYLT1Q8NBI6 393 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 ZMIZ2Q8NF64 920 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 MDM1Q8TC05 714 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 FOXJ1Q92949 421 aa14.8□□□□□ -0.04
SMARCA4-206ENST00000538456 JAKMIP2Q96AA8 810 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms