RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ZBED1O96006 694 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 SETSIPP0DME0 302 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 LCP1P13796 627 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 ATP5C1P36542 298 aaKnown RBP13.83□□□□□ -0.2
PRKDC-206ENST00000536429 MAGEA9P43362 315 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 MFAP3P55082 362 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 SLC8A3P57103 927 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 YWHAGP61981 247 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRKDC-206ENST00000536429 SATB1Q01826 763 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 MESP2Q0VG99 397 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 DHCR24Q15392 516 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 STX1AQ16623 288 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 C1orf228Q6PIY5 440 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 RHBDF2Q6PJF5 856 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 C12orf40Q86WS4 652 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 DDX42Q86XP3 938 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRKDC-206ENST00000536429 CLEC4CQ8WTT0 213 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 LRRC4Q9HBW1 653 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 POLR3BQ9NW08 1133 aaPredicted RBP13.83□□□□□ -0.2
PRKDC-206ENST00000536429 CLIC5Q9NZA1 410 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 SH3BP1Q9Y3L3 701 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 R4GN57 208 aa13.83□□□□□ -0.2
PRKDC-206ENST00000536429 E2F8A0AVK6 867 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 YJEFN3A6XGL0 299 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 E7ENQ6 273 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 PES1O00541 588 aaKnown RBP13.82□□□□□ -0.2
PRKDC-206ENST00000536429 LETM1O95202 739 aaPredicted RBP13.82□□□□□ -0.2
PRKDC-206ENST00000536429 EEF1GP26641 437 aaKnown RBP13.82□□□□□ -0.2
PRKDC-206ENST00000536429 USP8P40818 1118 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 OPRD1P41143 372 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 SLC6A11P48066 632 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 KLK7P49862 253 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 CSTF1Q05048 431 aaKnown RBP13.82□□□□□ -0.2
PRKDC-206ENST00000536429 TYRO3Q06418 890 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 EFEMP1Q12805 493 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 LRRC32Q14392 662 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 NCAPHQ15003 741 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 KRT31Q15323 416 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 LY6G5CQ5SRR4 150 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 CAVIN1Q6NZI2 390 aaKnown RBP13.82□□□□□ -0.2
PRKDC-206ENST00000536429 KLHDC10Q6PID8 442 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 ENOSF1Q7L5Y1 443 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 ALYREFQ86V81 257 aaKnown RBP13.82□□□□□ -0.2
PRKDC-206ENST00000536429 MIB1Q86YT6 1006 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 SFTPA1Q8IWL2 248 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 KIAA1958Q8N8K9 716 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 KCTD13Q8WZ19 329 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 SHC3Q92529 594 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 P2RY11Q96G91 374 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 P2RY13Q9BPV8 354 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 HSD3B7Q9H2F3 369 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 PRMT8Q9NR22 394 aaPredicted RBP13.82□□□□□ -0.2
PRKDC-206ENST00000536429 CYTH4Q9UIA0 394 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 RASAL2Q9UJF2 1139 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 DNMT3LQ9UJW3 386 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 DNAJC12Q9UKB3 198 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 GPR179Q6PRD1 2367 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 MYH10P35580 1976 aa13.82□□□□□ -0.2
PRKDC-206ENST00000536429 FOXN3O00409 490 aaPredicted RBP13.81□□□□□ -0.2
PRKDC-206ENST00000536429 THAP12O43422 761 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 KLKB1P03952 638 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 HMBSP08397 361 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 RALAP11233 206 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 TDGF1P13385 188 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 GNA15P30679 374 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 NBL1P41271 181 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 GPD2P43304 727 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 PSEN1P49768 467 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 DAOAP59103 153 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 GRSF1Q12849 480 aaKnown RBP eCLIP13.81□□□□□ -0.27e-12■■■■■ 62.7
PRKDC-206ENST00000536429 SIX6OS1Q8N1H7 587 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 ZNF606Q8WXB4 792 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 EDEM1Q92611 657 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 CD101Q93033 1021 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 LSM14BQ9BX40 385 aaKnown RBP13.81□□□□□ -0.2
PRKDC-206ENST00000536429 VPS16Q9H269 839 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 WDR87Q6ZQQ6 2873 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 MIA3Q5JRA6 1907 aa13.81□□□□□ -0.2
PRKDC-206ENST00000536429 HELZP42694 1942 aaKnown RBP13.8□□□□□ -0.2
PRKDC-206ENST00000536429 SLC9A3R1O14745 358 aaPredicted RBP13.8□□□□□ -0.2
PRKDC-206ENST00000536429 RNF40O75150 1001 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 STC2O76061 302 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 ADH5P11766 374 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 MRE11P49959 708 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 MYL5Q02045 173 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 DMWDQ09019 674 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 NR1H3Q13133 447 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 STILQ15468 1287 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 DGKKQ5KSL6 1271 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 KLHDC7AQ5VTJ3 777 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 BSPRYQ5W0U4 402 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 Q6ZNB5 142 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 HTR3DQ70Z44 454 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 TMEM25Q86YD3 366 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 PASD1Q8IV76 773 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 ARHGAP18Q8N392 663 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 ZNF276Q8N554 614 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 MIS12Q9H081 205 aa13.8□□□□□ -0.2
PRKDC-206ENST00000536429 IRF2BPLQ9H1B7 796 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms