RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ASIC2Q16515 512 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 EML3Q32P44 896 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 HSF5Q4G112 596 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 C2CD6Q53TS8 623 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 SYCP2LQ5T4T6 812 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TMEM164Q5U3C3 297 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GPR107Q5VW38 600 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GALNT18Q6P9A2 607 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CCDC62Q6P9F0 684 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 LMBR1LQ6UX01 489 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 Q6ZNB5 142 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TMEM26Q6ZUK4 368 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 DENND5BQ6ZUT9 1274 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 OTOP3Q7RTS5 596 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CATIPQ7Z7H3 387 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GLRX5Q86SX6 157 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PRPF39Q86UA1 669 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 TMEM151BQ8IW70 566 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ZSCAN29Q8IWY8 852 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 ELMOD1Q8N336 334 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ALLCQ8N6M5 410 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 RDH13Q8NBN7 331 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PRR7Q8TB68 274 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 SLC35G2Q8TBE7 412 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TBC1D15Q8TC07 691 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CALML6Q8TD86 181 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GJA10Q969M2 543 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 VCPIP1Q96JH7 1222 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CAPNS2Q96L46 248 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 SLC29A1Q99808 456 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CTRCQ99895 268 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TRABDQ9H4I3 376 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 STN1Q9H668 368 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 MTRF1LQ9UGC7 380 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 ASIC3Q9UHC3 531 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CNOT7Q9UIV1 285 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 NIP7Q9Y221 180 aaKnown RBP eCLIP3.86□□□□□ -1.79
MCF2-210ENST00000536274 PCDHA3Q9Y5H8 950 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 SNX9Q9Y5X1 595 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 MAP3K15Q6ZN16 1313 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 A0A1W2PPC1 479 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GSTTP1A0A1W2PQM5 241 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ARHGAP10A1A4S6 786 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 C2CD2LO14523 706 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CLOCKO15516 846 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CCNT1O60563 726 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 IDH1O75874 414 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 TSPAN9O75954 239 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CAPN1P07384 714 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 SLC10A3P09131 477 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CD48P09326 243 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 MX2P20592 715 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GABRB3P28472 473 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GCAP28676 217 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 SLC19A1P41440 591 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ALDH1A3P47895 512 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 RFX5P48382 616 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 ITGA8P53708 1063 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GALCP54803 685 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PRAMEP78395 509 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 POU6F2P78424 691 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 PPP2R2BQ00005 443 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 IL1RL1Q01638 556 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TRAF2Q12933 501 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CALCOCO2Q13137 446 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 DLG2Q15700 870 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TUSC1Q2TAM9 212 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 INAVAQ3KP66 663 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CDONQ4KMG0 1287 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 AARS2Q5JTZ9 985 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 FYB2Q5VWT5 728 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ARL6IP4Q66PJ3 421 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 MFSD5Q6N075 450 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 NIPAL1Q6NVV3 410 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PPP1R18Q6NYC8 613 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ZCCHC8Q6NZY4 707 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 PIWIL3Q7Z3Z3 882 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 CCDC84Q86UT8 332 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 IGFN1Q86VF2 1251 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GLYCTKQ8IVS8 523 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 SP8Q8IXZ3 490 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TRIM22Q8IYM9 498 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ELMOD2Q8IZ81 293 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 RASGEF1CQ8N431 466 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 LEMD2Q8NC56 503 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 FIG4Q92562 907 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TTC17Q96AE7 1141 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 MAGED4Q96JG8 741 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 VPS35Q96QK1 796 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 MMP19Q99542 508 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 IKZF4Q9H2S9 585 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 COPS7BQ9H9Q2 264 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 PARVBQ9HBI1 364 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 DISC1Q9NRI5 854 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 NAGPAQ9UK23 515 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 AMFRQ9UKV5 643 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 FZD1Q9UP38 647 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PLA2G4CQ9UP65 541 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 COG5Q9UP83 839 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PCDHGA7Q9Y5G6 932 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms