RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 MPP3Q13368 585 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 SPARCL1Q14515 664 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 TMEM63BQ5T3F8 832 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 MARK2Q7KZI7 788 aaKnown RBP18.65■□□□□ 0.58
RAB40C-203ENST00000535977 FASTKD5Q7L8L6 764 aaKnown RBP18.65■□□□□ 0.58
RAB40C-203ENST00000535977 NT5DC4Q86YG4 428 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 ZBED8Q8IZ13 594 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 KCTD6Q8NC69 237 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 WDR60Q8WVS4 1066 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 CCDC28BQ9BUN5 200 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 RSAD1Q9HA92 442 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 TBC1D30Q9Y2I9 924 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.65■□□□□ 0.58
RAB40C-203ENST00000535977 NUMBLQ9Y6R0 609 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 LACTBL1A8MY62 500 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 B4GALT5O43286 388 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 GCAP28676 217 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 SPATA24Q86W54 205 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 ATP11CQ8NB49 1132 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 JOSD2Q8TAC2 188 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 STMN2Q93045 179 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 CPXM1Q96SM3 734 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 TRABDQ9H4I3 376 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 ELP3Q9H9T3 547 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 PSMC3IPQ9P2W1 217 aaPredicted RBP18.65■□□□□ 0.58
RAB40C-203ENST00000535977 RBPJLQ9UBG7 517 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 ZNF212Q9UDV6 495 aa18.65■□□□□ 0.58
RAB40C-203ENST00000535977 PAPPA2Q9BXP8 1791 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 ANK1P16157 1881 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-203ENST00000535977 APOC4-APOC2K7ER74 178 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 C22orf31O95567 290 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 STAU1O95793 577 aaKnown RBP18.64■□□□□ 0.57
RAB40C-203ENST00000535977 APOC2P02655 101 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 STIP1P31948 543 aaKnown RBP18.64■□□□□ 0.57
RAB40C-203ENST00000535977 ARFGAP1Q8N6T3 406 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 LZICQ8WZA0 190 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 RMI1Q9H9A7 625 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 CIDEBQ9UHD4 219 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 CYTH4Q9UIA0 394 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 GPR25O00155 361 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 VAV1P15498 845 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 KRT15P19012 456 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 CLCN3P51790 818 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 GEMIN4P57678 1058 aaKnown RBP18.64■□□□□ 0.57
RAB40C-203ENST00000535977 PPIL2Q13356 520 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 LAMC2Q13753 1193 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 TTLL12Q14166 644 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-203ENST00000535977 STILQ15468 1287 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 EFHC2Q5JST6 749 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 SH2D4BQ5SQS7 431 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 OLFML2BQ68BL8 750 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 MTDHQ86UE4 582 aaKnown RBP18.64■□□□□ 0.57
RAB40C-203ENST00000535977 SHCBP1Q8NEM2 672 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 DENND1AQ8TEH3 1009 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 PYROXD1Q8WU10 500 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 HAUS1Q96CS2 278 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 OLFM3Q96PB7 478 aa18.64■□□□□ 0.57
RAB40C-203ENST00000535977 DICER1Q9UPY3 1922 aaKnown RBP18.63■□□□□ 0.57
RAB40C-203ENST00000535977 POC1B-GALNT4F8VUJ3 575 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 GSC2O15499 205 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 MICAL2O94851 1124 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 ASMTLO95671 621 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 NFICP08651 508 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 IL1R2P27930 398 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 CD151P48509 253 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 MAP7Q14244 749 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 CTC1Q2NKJ3 1217 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 KLHL38Q2WGJ6 581 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 JADE1Q6IE81 842 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 NAT8LQ8N9F0 302 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 E7ESA3 106 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 TRUB2O95900 331 aaKnown RBP18.63■□□□□ 0.57
RAB40C-203ENST00000535977 ERBB2P04626 1255 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 ITGB3P05106 788 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 RAP1GAPP47736 663 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 FAM47CQ5HY64 1035 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 NLRP9Q7RTR0 991 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 FBXO16Q8IX29 292 aaPredicted RBP18.63■□□□□ 0.57
RAB40C-203ENST00000535977 TRAPPC12Q8WVT3 735 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 ACSF2Q96CM8 615 aaPredicted RBP18.63■□□□□ 0.57
RAB40C-203ENST00000535977 MPP4Q96JB8 637 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 BTBD10Q9BSF8 475 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 SDCBP2Q9H190 292 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 IFT122Q9HBG6 1241 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 ITGA11Q9UKX5 1188 aa18.63■□□□□ 0.57
RAB40C-203ENST00000535977 MCF2LO15068 1137 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 CCDC22O60826 627 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 EDF1O60869 148 aaKnown RBP18.62■□□□□ 0.57
RAB40C-203ENST00000535977 SPAG7O75391 227 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 ZNF189O75820 626 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-203ENST00000535977 ZNF143P52747 638 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-203ENST00000535977 CDH8P55286 799 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 TFDP2Q14188 446 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 SPDYAQ5MJ70 313 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 IZUMO2Q6UXV1 221 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 CLNKQ7Z7G1 428 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 RFX6Q8HWS3 928 aa18.62■□□□□ 0.57
RAB40C-203ENST00000535977 MAK16Q9BXY0 300 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms