RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 HIP1RO75146 1068 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 MPOP05164 745 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 ITGAVP06756 1048 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 MBL2P11226 248 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-204ENST00000535180 XBP1P17861 261 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 ABCB4P21439 1286 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 USP46P62068 366 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 TLE1Q04724 770 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 LINC00303Q3SY05 128 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 INTS6LQ5JSJ4 861 aaKnown RBP11.42□□□□□ -0.58
VAMP1-204ENST00000535180 BLOC1S2Q6QNY1 142 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 CCDC81Q6ZN84 652 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 DENND5BQ6ZUT9 1274 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 SPATA2LQ8IUW3 424 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-204ENST00000535180 PRCCQ92733 491 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-204ENST00000535180 SPATA17Q96L03 361 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 CEP295NLQ96MC4 621 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 DUSP9Q99956 384 aaKnown RBP11.42□□□□□ -0.58
VAMP1-204ENST00000535180 DERAQ9Y315 318 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 PCDHB1Q9Y5F3 818 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 STON1Q9Y6Q2 735 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 KIF26BQ2KJY2 2108 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 LRBAP50851 2863 aa11.42□□□□□ -0.58
VAMP1-204ENST00000535180 CACNG3O60359 315 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 MT-CO3P00414 261 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 ACADMP11310 421 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 CKMT2P17540 419 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 ACAT1P24752 427 aaKnown RBP11.41□□□□□ -0.58
VAMP1-204ENST00000535180 MAGEA11P43364 429 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 LSSP48449 732 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 GABREP78334 506 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 E2F1Q01094 437 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 MYL7Q01449 175 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 TMEM132DQ14C87 1099 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 ARL13BQ3SXY8 428 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 SV2CQ496J9 727 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 PRAMEF14Q5SWL7 426 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 ADAT2Q7Z6V5 191 aaKnown RBP11.41□□□□□ -0.58
VAMP1-204ENST00000535180 BBS7Q8IWZ6 715 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 TMEM161BQ8NDZ6 487 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 TNFRSF25Q93038 417 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 FAM212AQ96EL1 285 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 JAKMIP1Q96N16 626 aaKnown RBP11.41□□□□□ -0.58
VAMP1-204ENST00000535180 XPO6Q96QU8 1125 aaKnown RBP11.41□□□□□ -0.58
VAMP1-204ENST00000535180 MMS19Q96T76 1030 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 ELF4Q99607 663 aaPredicted RBP11.41□□□□□ -0.58
VAMP1-204ENST00000535180 TTLL2Q9BWV7 592 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 ASCL3Q9NQ33 180 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 THSD1Q9NS62 852 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 GJB4Q9NTQ9 266 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 DDX43Q9NXZ2 648 aaKnown RBP11.41□□□□□ -0.58
VAMP1-204ENST00000535180 EHD2Q9NZN4 543 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 KCNG1Q9UIX4 513 aa11.41□□□□□ -0.58
VAMP1-204ENST00000535180 WNT7AO00755 349 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 VILLO15195 856 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 OGTO15294 1046 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 TSPAN3O60637 253 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 ABL1P00519 1130 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 MAPTP10636 758 aaKnown RBP11.4□□□□□ -0.58
VAMP1-204ENST00000535180 RPS6KB1P23443 525 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 CD27P26842 260 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 C21orf59P57076 290 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 GRIN1Q05586 938 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 MAPK7Q13164 816 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 NR5A1Q13285 461 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 ENPP2Q13822 863 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 SHBQ15464 509 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 ECM1Q16610 540 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 CPLX2Q6PUV4 134 aaKnown RBP11.4□□□□□ -0.58
VAMP1-204ENST00000535180 FAM124AQ86V42 546 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 PDCL2Q8N4E4 241 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 BIRC7Q96CA5 298 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 LIN37Q96GY3 246 aaPredicted RBP11.4□□□□□ -0.58
VAMP1-204ENST00000535180 VCPIP1Q96JH7 1222 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 SEMA3CQ99985 751 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 ACE2Q9BYF1 805 aaPredicted RBP11.4□□□□□ -0.58
VAMP1-204ENST00000535180 TMEM60Q9H2L4 133 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 POLR1BQ9H9Y6 1135 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 DPP3Q9NY33 737 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 LRWD1Q9UFC0 647 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 SH3BP1Q9Y3L3 701 aa11.4□□□□□ -0.58
VAMP1-204ENST00000535180 POLQO75417 2590 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 TDRD6O60522 2096 aaKnown RBP11.39□□□□□ -0.59
VAMP1-204ENST00000535180 NPC1O15118 1278 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 YKT6O15498 198 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 CISD3P0C7P0 127 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 SFTPCP11686 197 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 TYRP14679 529 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 ACP1P24666 158 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 ACSL1P33121 698 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 DGKGP49619 791 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 COPAP53621 1224 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 ST3GAL1Q11201 340 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 CCDC142Q17RM4 750 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 HAUS3Q68CZ6 603 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 VSTM1Q6UX27 236 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 TMEM86AQ8N2M4 240 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 FAM26EQ8N5C1 309 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 KCNB2Q92953 911 aa11.39□□□□□ -0.59
VAMP1-204ENST00000535180 CCDC97Q96F63 343 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms