RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 INTS6LQ5JSJ4 861 aaKnown RBP13.96□□□□□ -0.17
BEST1-208ENST00000534553 RAB41Q5JT25 222 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 KCTD16Q68DU8 428 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 FAM171BQ6P995 826 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 TRAF7Q6Q0C0 670 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 CCDC77Q9BR77 488 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 CAPS2Q9BXY5 557 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 ELAC1Q9H777 363 aaKnown RBP13.96□□□□□ -0.17
BEST1-208ENST00000534553 AAASQ9NRG9 546 aa13.96□□□□□ -0.17
BEST1-208ENST00000534553 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.95□□□□□ -0.18
BEST1-208ENST00000534553 DNM1LO00429 736 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
BEST1-208ENST00000534553 TCEA3O75764 348 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 IFNB1P01574 187 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 SELPP16109 830 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 TKTL1P51854 596 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 ZNF135P52742 658 aaPredicted RBP13.95□□□□□ -0.18
BEST1-208ENST00000534553 BCAR1P56945 870 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 MAP3K7CLP57077 242 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 XRCC4Q13426 336 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 RNASEH2BQ5TBB1 312 aaKnown RBP13.95□□□□□ -0.18
BEST1-208ENST00000534553 MFSD5Q6N075 450 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 BNIPLQ7Z465 357 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 PPIL6Q8IXY8 311 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 OR2W6PQ8NHA6 318 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 CLEC4CQ8WTT0 213 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 RTP4Q96DX8 246 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 FRMD8Q9BZ67 464 aaPredicted RBP13.95□□□□□ -0.18
BEST1-208ENST00000534553 ADAM7Q9H2U9 754 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 CENPHQ9H3R5 247 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 CNOT10Q9H9A5 744 aaKnown RBP13.95□□□□□ -0.18
BEST1-208ENST00000534553 PPCSQ9HAB8 311 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 PCDHB8Q9UN66 801 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 AP4E1Q9UPM8 1137 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 INPP5FQ9Y2H2 1132 aa13.95□□□□□ -0.18
BEST1-208ENST00000534553 SRRM3A6NNA2 597 aaPredicted RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 CLDN5O00501 218 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 TRAPPC3O43617 180 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 AGTP01019 485 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 ARL4AP40617 200 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 SULT1E1P49888 294 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 DAOAP59103 153 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 KIAA0319Q5VV43 1072 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 OVOS1Q6IE37 1185 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 CENPUQ71F23 418 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 LRRC8DQ7L1W4 858 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 BEND5Q7L4P6 421 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 CDKL3Q8IVW4 592 aaPredicted RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 DEFB106AQ8N104 65 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 PLD5Q8N7P1 536 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 PGAP3Q96FM1 320 aaPredicted RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 SERPINB12Q96P63 405 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 RBM15Q96T37 977 aaKnown RBP eCLIP13.94□□□□□ -0.18
BEST1-208ENST00000534553 NPY6RQ99463 290 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.94□□□□□ -0.18
BEST1-208ENST00000534553 TRPV6Q9H1D0 765 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 BCLAF3A2AJT9 711 aaKnown RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 MYBPHLA2RUH7 354 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 CAPN9O14815 690 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 RASGRF2O14827 1237 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 RGS16O15492 202 aaPredicted RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 F9P00740 461 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 IL4RP24394 825 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 L1CAMP32004 1257 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 CHKAP35790 457 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 VEGFBP49765 207 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 DSC1Q08554 894 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 STAT4Q14765 748 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 DCAF6Q58WW2 860 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 NOMO2Q5JPE7 1267 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 DARS2Q6PI48 645 aaKnown RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 PPP1R21Q6ZMI0 780 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 RIBC1Q8N443 379 aaPredicted RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 ZNF296Q8WUU4 475 aaPredicted RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 APBB2Q92870 758 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 MYLPFQ96A32 169 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 ZBTB9Q96C00 473 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 TLCD1Q96CP7 247 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 SMOQ99835 787 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 PAAF1Q9BRP4 392 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 OSBPL7Q9BZF2 842 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 DHX35Q9H5Z1 703 aaKnown RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 NRDE2Q9H7Z3 1164 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 DMAP1Q9NPF5 467 aaPredicted RBP13.94□□□□□ -0.18
BEST1-208ENST00000534553 PAK5Q9P286 719 aa13.94□□□□□ -0.18
BEST1-208ENST00000534553 SF3B1O75533 1304 aaKnown RBP eCLIP13.94□□□□□ -0.184e-7■■■■■ 133.7
BEST1-208ENST00000534553 PECAM1P16284 738 aaPredicted RBP13.93□□□□□ -0.18
BEST1-208ENST00000534553 CYP2F1P24903 491 aa13.93□□□□□ -0.18
BEST1-208ENST00000534553 YWHAHQ04917 246 aaPredicted RBP13.93□□□□□ -0.18
BEST1-208ENST00000534553 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
BEST1-208ENST00000534553 ZC3H12AQ5D1E8 599 aaKnown RBP13.93□□□□□ -0.18
BEST1-208ENST00000534553 TAOK1Q7L7X3 1001 aa13.93□□□□□ -0.18
BEST1-208ENST00000534553 SH2D3CQ8N5H7 860 aa13.93□□□□□ -0.18
BEST1-208ENST00000534553 PCDH19Q8TAB3 1148 aa13.93□□□□□ -0.18
BEST1-208ENST00000534553 NTAN1Q96AB6 310 aa13.93□□□□□ -0.18
BEST1-208ENST00000534553 FERMT1Q9BQL6 677 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms