RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 KCNA1Q09470 495 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 IFRD2Q12894 506 aaPredicted RBP13.08□□□□□ -0.32
SVIP-205ENST00000533774 GNL2Q13823 731 aaKnown RBP13.08□□□□□ -0.32
SVIP-205ENST00000533774 MCM6Q14566 821 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 BTBD8Q5XKL5 378 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 SLFN12LQ6IEE8 588 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 CCDC83Q8IWF9 413 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 BRSK2Q8IWQ3 736 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 POMGNT1Q8WZA1 660 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 OTUB2Q96DC9 234 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 SAAL1Q96ER3 474 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 FCRL3Q96P31 734 aaPredicted RBP13.08□□□□□ -0.32
SVIP-205ENST00000533774 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 ZHX3Q9H4I2 956 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 GMIPQ9P107 970 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 USP36Q9P275 1121 aaKnown RBP13.08□□□□□ -0.32
SVIP-205ENST00000533774 EIF2B4Q9UI10 523 aaKnown RBP13.08□□□□□ -0.32
SVIP-205ENST00000533774 CDH9Q9ULB4 789 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 NFE2L3Q9Y4A8 694 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 PCDHGB2Q9Y5G2 931 aa13.08□□□□□ -0.32
SVIP-205ENST00000533774 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 J3QKU1 62 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 KCNK3O14649 394 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 TRIM66O15016 1216 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 KRT19P08727 400 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 SCP2P22307 547 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 PPP3CCP48454 512 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 CSNK1EP49674 416 aaKnown RBP13.07□□□□□ -0.32
SVIP-205ENST00000533774 PGFP49763 221 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 ANAPC15P60006 121 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 FUT11Q495W5 492 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 MDH1BQ5I0G3 518 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 GRAMD4Q6IC98 578 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 DDX42Q86XP3 938 aaKnown RBP eCLIP13.07□□□□□ -0.32
SVIP-205ENST00000533774 LSM14AQ8ND56 463 aaKnown RBP13.07□□□□□ -0.32
SVIP-205ENST00000533774 C8orf48Q96LL4 319 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 CEP295NLQ96MC4 621 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 STRA6Q9BX79 667 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 MKRN2Q9H000 416 aaKnown RBP13.07□□□□□ -0.32
SVIP-205ENST00000533774 CCSER2Q9H7U1 834 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 DNAJC17Q9NVM6 304 aaKnown RBP13.07□□□□□ -0.32
SVIP-205ENST00000533774 CHORDC1Q9UHD1 332 aaPredicted RBP13.07□□□□□ -0.32
SVIP-205ENST00000533774 PTPRJQ12913 1337 aa13.07□□□□□ -0.32
SVIP-205ENST00000533774 PTPN13Q12923 2485 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 GOLGA8IPA6NC78 632 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 GOLGA8JA6NMD2 632 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 METTL12A8MUP2 240 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 CLDN5O00501 218 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 TNFSF14O43557 240 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 CACNG3O60359 315 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 CISD3P0C7P0 127 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 IRF1P10914 325 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 HLA-EP13747 358 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 ANXA13P27216 316 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 NEK4P51957 841 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 KIF19Q2TAC6 998 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 KCNT1Q5JUK3 1230 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 TDRD10Q5VZ19 366 aaKnown RBP13.06□□□□□ -0.32
SVIP-205ENST00000533774 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
SVIP-205ENST00000533774 KCTD17Q8N5Z5 321 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 MYCBPAPQ8TBZ2 947 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 CDK5RAP3Q96JB5 506 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 ZNF518BQ9C0D4 1074 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 PDE11AQ9HCR9 933 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 ITM2CQ9NQX7 267 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 ITGA11Q9UKX5 1188 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 SH3BP1Q9Y3L3 701 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 SNX11Q9Y5W9 270 aa13.06□□□□□ -0.32
SVIP-205ENST00000533774 NEDD8-MDP1E9PL57 170 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 ZBTB24O43167 697 aaPredicted RBP13.05□□□□□ -0.32
SVIP-205ENST00000533774 TYRP14679 529 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 WARSP23381 471 aaKnown RBP13.05□□□□□ -0.32
SVIP-205ENST00000533774 TPMTP51580 245 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 RBP5P82980 135 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 SEMG2Q02383 582 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 CFHR1Q03591 330 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 SDE2Q6IQ49 451 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 IL27RAQ6UWB1 636 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 LAYNQ6UX15 382 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 ZNF720Q7Z2F6 126 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 CADM4Q8NFZ8 388 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 OR5B17Q8NGF7 314 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 SCAMP5Q8TAC9 235 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 SLITRK1Q96PX8 696 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 DUSP9Q99956 384 aaKnown RBP13.05□□□□□ -0.32
SVIP-205ENST00000533774 MRPL45Q9BRJ2 306 aaKnown RBP13.05□□□□□ -0.32
SVIP-205ENST00000533774 DPEP3Q9H4B8 488 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 DNMT3LQ9UJW3 386 aa13.05□□□□□ -0.32
SVIP-205ENST00000533774 DOCK9Q9BZ29 2069 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 E9PAM4 449 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 CBX4O00257 560 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 YWHAQP27348 245 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 PREPLQ4J6C6 727 aaPredicted RBP13.04□□□□□ -0.32
SVIP-205ENST00000533774 HECTD3Q5T447 861 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 TPGS1Q6ZTW0 290 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 NUDT18Q6ZVK8 323 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 DPH6Q7L8W6 267 aa13.04□□□□□ -0.32
SVIP-205ENST00000533774 SFR1Q86XK3 245 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms