RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CAPRIN2Q6IMN6 1127 aaKnown RBP15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 C16orf89Q6UX73 402 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 RASGEF1CQ8N431 466 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 SLC2A14Q8TDB8 520 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 KLRG1Q96E93 195 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 DSEQ9UL01 958 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 RIPK3Q9Y572 518 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 TOMM70O94826 608 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 PYGLP06737 847 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 ETFBP38117 255 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 TAF2Q6P1X5 1199 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 STKLD1Q8NE28 680 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 CATSPER1Q8NEC5 780 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 TCP10LQ8TDR4 215 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 NRBF2Q96F24 287 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 PCDHB18PQ96TA0 734 aa15.82■□□□□ 0.12
PCDHA3-202ENST00000532566 SNED1Q8TER0 1413 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 E2F6O75461 281 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 RECQL4O94761 1208 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 NR2C2P49116 596 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 COPAP53621 1224 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 KLC1Q07866 573 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 ACVR2BQ13705 512 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 RBBP7Q16576 425 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 IQSEC1Q6DN90 963 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 HTR3CQ8WXA8 447 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 SGF29Q96ES7 293 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 FAM84AQ96KN4 292 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 LMCD1Q9NZU5 365 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 LSM7Q9UK45 103 aaKnown RBP15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 SCN11AQ9UI33 1791 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 SRRM3A6NNA2 597 aaPredicted RBP15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 LIASO43766 372 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 KPNA6O60684 536 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 ANP32DO95626 131 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 BGNP21810 368 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 RPL7AP62424 266 aaKnown RBP15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 AUHQ13825 339 aaKnown RBP15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 TLK2Q86UE8 772 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 DNAJC9Q8WXX5 260 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 RRN3Q9NYV6 651 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 MYH2Q9UKX2 1941 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 A0A0B4J269 797 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 AMPD1P23109 780 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 HADHAP40939 763 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 HARS2P49590 506 aaKnown RBP15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 TIGD7Q6NT04 549 aaPredicted RBP15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 MTDHQ86UE4 582 aaKnown RBP15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 DEFB106AQ8N104 65 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 SHCBP1Q8NEM2 672 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 COL20A1Q9P218 1284 aa15.81■□□□□ 0.12
PCDHA3-202ENST00000532566 MPP3Q13368 585 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 MFSD10Q14728 455 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 STRA8Q7Z7C7 330 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 MIB1Q86YT6 1006 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 KIAA0319LQ8IZA0 1049 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 SPDYE1Q8NFV5 336 aaPredicted RBP15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 ART4Q93070 314 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 CENPTQ96BT3 561 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 MUC3BQ9H195 1237 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 TIMM13Q9Y5L4 95 aaPredicted RBP15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 ZBBXA8MT70 800 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 UPP2O95045 317 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 GRK2P25098 689 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 DPYSL3Q14195 570 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 KCNT2Q6UVM3 1135 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 TRPM4Q8TD43 1214 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 SAE1Q9UBE0 346 aaPredicted RBP15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 CASTOR2A6NHX0 329 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 JAM2P57087 298 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 LRRC36Q1X8D7 754 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 UNC93AQ86WB7 457 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 SUGP1Q8IWZ8 645 aaKnown RBP15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 CD248Q9HCU0 757 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 TRPC7Q9HCX4 862 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 DNAJC6O75061 913 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 IL10P22301 178 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 RBL1P28749 1068 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 AQP5P55064 265 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 ABCE1P61221 599 aaKnown RBP15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 TWF1Q12792 350 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 EEF1DP3Q658K8 133 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 ANGPTL8Q6UXH0 198 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 PCYOX1LQ8NBM8 494 aa15.8■□□□□ 0.12
PCDHA3-202ENST00000532566 CYBBP04839 570 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 HMOX2P30519 316 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 PHEXP78562 749 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 MED21Q13503 144 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 TRIP10Q15642 601 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 NFE2Q16621 373 aaPredicted RBP15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 C15orf59Q2T9L4 293 aaPredicted RBP15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 SNX19Q92543 992 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 CTNNAL1Q9UBT7 734 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 AFF4Q9UHB7 1163 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 FARP1Q9Y4F1 1045 aaPredicted RBP15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 RALBP11234 206 aa15.79■□□□□ 0.12
PCDHA3-202ENST00000532566 ZNF143P52747 638 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms