RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CLIC5Q9NZA1 410 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 RWDD2AQ9UIY3 292 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 LSM7Q9UK45 103 aaKnown RBP18.13■□□□□ 0.49
PHRF1-204ENST00000532550 NUDT5Q9UKK9 219 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 TSPAN16Q9UKR8 245 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 HRO43593 1189 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 EIF2DP41214 584 aaKnown RBP18.12■□□□□ 0.49
PHRF1-204ENST00000532550 TKTL1P51854 596 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 BCAT1P54687 386 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 PDE4CQ08493 712 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 GAB4Q2WGN9 574 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 ANO4Q32M45 955 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 RAB41Q5JT25 222 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 SYT13Q7L8C5 426 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 SCD5Q86SK9 330 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 TTC30AQ86WT1 665 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 CAMKK1Q8N5S9 505 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 UBR7Q8N806 425 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 LMO3Q8TAP4 145 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 EZH1Q92800 747 aaPredicted RBP18.12■□□□□ 0.49
PHRF1-204ENST00000532550 WBP2Q969T9 261 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 ACDQ96AP0 544 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 LRRC4Q9HBW1 653 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 SPHK2Q9NRA0 654 aa18.12■□□□□ 0.49
PHRF1-204ENST00000532550 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.11■□□□□ 0.49
PHRF1-204ENST00000532550 K7EQS6 105 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 XPO1O14980 1071 aaKnown RBP18.11■□□□□ 0.49
PHRF1-204ENST00000532550 MDM4O15151 490 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 APODP05090 189 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 PAEPP09466 180 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 SEC13P55735 322 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 BST2Q10589 180 aaKnown RBP18.11■□□□□ 0.49
PHRF1-204ENST00000532550 PREPLQ4J6C6 727 aaPredicted RBP18.11■□□□□ 0.49
PHRF1-204ENST00000532550 C2orf27AQ580R0 203 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 RRAGAQ7L523 313 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 WDR5BQ86VZ2 330 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 TMEM25Q86YD3 366 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 KIAA2013Q8IYS2 634 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 MLKLQ8NB16 471 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 UBA3Q8TBC4 463 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 GMEB2Q9UKD1 530 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 ZNF292O60281 2723 aa18.11■□□□□ 0.49
PHRF1-204ENST00000532550 SPTBN4Q9H254 2564 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 CCDC163A0A0D9SF12 145 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 KAT7O95251 611 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 ZBED1O96006 694 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 HOXC13P31276 330 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 GRIA2P42262 883 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 PXNP49023 591 aaPredicted RBP18.1■□□□□ 0.49
PHRF1-204ENST00000532550 COG7P83436 770 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 GCNT1Q02742 428 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 DMC1Q14565 340 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 LPAL2Q16609 132 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 TPD52L1Q16890 204 aaPredicted RBP18.1■□□□□ 0.49
PHRF1-204ENST00000532550 NUDT18Q6ZVK8 323 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 CEP68Q76N32 757 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 RSRC2Q7L4I2 434 aaKnown RBP18.1■□□□□ 0.49
PHRF1-204ENST00000532550 MIB1Q86YT6 1006 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 GPR161Q8N6U8 529 aaKnown RBP18.1■□□□□ 0.49
PHRF1-204ENST00000532550 NAT16Q8N8M0 369 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 USP33Q8TEY7 942 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 IPO9Q96P70 1041 aaKnown RBP18.1■□□□□ 0.49
PHRF1-204ENST00000532550 CLSTN2Q9H4D0 955 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 ARHGEF4Q9NR80 690 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 POLR3BQ9NW08 1133 aaPredicted RBP18.1■□□□□ 0.49
PHRF1-204ENST00000532550 SDK1Q7Z5N4 2213 aa18.1■□□□□ 0.49
PHRF1-204ENST00000532550 A0A0A0MRY4 1105 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 RNF225M0QZC1 329 aaPredicted RBP18.09■□□□□ 0.49
PHRF1-204ENST00000532550 TULP2O00295 520 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 O00370 1275 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 GREM1O60565 184 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 SETSIPP0DME0 302 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 TNFRSF4P43489 277 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 YWHAGP61981 247 aaKnown RBP eCLIP18.09■□□□□ 0.49
PHRF1-204ENST00000532550 MRPS21P82921 87 aaKnown RBP18.09■□□□□ 0.49
PHRF1-204ENST00000532550 EFEMP1Q12805 493 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 SRSF5Q13243 272 aaKnown RBP18.09■□□□□ 0.49
PHRF1-204ENST00000532550 STILQ15468 1287 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 CNGA2Q16280 664 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 PM20D1Q6GTS8 502 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 LAIR1Q6GTX8 287 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 LCLAT1Q6UWP7 414 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 C12orf40Q86WS4 652 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 KAT5Q92993 513 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 ULBP1Q9BZM6 244 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 WDR35Q9P2L0 1181 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 DEC1Q9P2X7 70 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 RASAL2Q9UJF2 1139 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 STRIP2Q9ULQ0 834 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 ZNF510Q9Y2H8 683 aa18.09■□□□□ 0.49
PHRF1-204ENST00000532550 MYO18AQ92614 2054 aaKnown RBP18.08■□□□□ 0.49
PHRF1-204ENST00000532550 TBC1D3BA6NDS4 549 aa18.08■□□□□ 0.48
PHRF1-204ENST00000532550 HOXC11O43248 304 aaPredicted RBP18.08■□□□□ 0.48
PHRF1-204ENST00000532550 KDSRQ06136 332 aa18.08■□□□□ 0.48
PHRF1-204ENST00000532550 TPGS1Q6ZTW0 290 aa18.08■□□□□ 0.48
PHRF1-204ENST00000532550 ARHGEF19Q8IW93 802 aa18.08■□□□□ 0.48
PHRF1-204ENST00000532550 SIX6OS1Q8N1H7 587 aa18.08■□□□□ 0.48
PHRF1-204ENST00000532550 RBBP8NLQ8NC74 664 aaPredicted RBP18.08■□□□□ 0.48
PHRF1-204ENST00000532550 KCTD13Q8WZ19 329 aa18.08■□□□□ 0.48
PHRF1-204ENST00000532550 TFAP2BQ92481 460 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms