RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 COQ8BQ96D53 544 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 CHST8Q9H2A9 424 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 USP29Q9HBJ7 922 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 PAXBP1Q9Y5B6 917 aa3.97□□□□□ -1.77
ATM-217ENST00000531957 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.96□□□□□ -1.78
ATM-217ENST00000531957 VSTM5A8MXK1 200 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 CLIC1O00299 241 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 TPP1O14773 563 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 CA12O43570 354 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 U2AF1L5P0DN76 240 aaPredicted RBP3.96□□□□□ -1.78
ATM-217ENST00000531957 MYF5P13349 255 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 PRF1P14222 555 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 TPH1P17752 444 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 CACNB3P54284 484 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 U2AF1Q01081 240 aaKnown RBP eCLIP3.96□□□□□ -1.78
ATM-217ENST00000531957 SLC14A1Q13336 389 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 RAPGEF1Q13905 1077 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 GRM3Q14832 879 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 KIAA0753Q2KHM9 967 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 CC2D1BQ5T0F9 858 aaKnown RBP3.96□□□□□ -1.78
ATM-217ENST00000531957 NXNQ6DKJ4 435 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 PPP4R4Q6NUP7 873 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 CLEC9AQ6UXN8 241 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 UNC13DQ70J99 1090 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 KRT73Q86Y46 540 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 C16orf52Q8NHV5 167 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.96□□□□□ -1.78
ATM-217ENST00000531957 TMEM79Q9BSE2 394 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 LRRC27Q9C0I9 530 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 ZNF287Q9HBT7 754 aa3.96□□□□□ -1.78
ATM-217ENST00000531957 G3BP2Q9UN86 482 aaKnown RBP3.96□□□□□ -1.78
ATM-217ENST00000531957 FYB1O15117 783 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 INSIG1O15503 277 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 PRAMEF2O60811 474 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 BTF3P20290 206 aaKnown RBP3.95□□□□□ -1.78
ATM-217ENST00000531957 PEX2P28328 305 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 TKTP29401 623 aaKnown RBP3.95□□□□□ -1.78
ATM-217ENST00000531957 CARSP49589 748 aaKnown RBP3.95□□□□□ -1.78
ATM-217ENST00000531957 CFHR3Q02985 330 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 POLD3Q15054 466 aaPredicted RBP3.95□□□□□ -1.78
ATM-217ENST00000531957 C10orf25Q5T742 122 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 PLAG1Q6DJT9 500 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 MRPL10Q7Z7H8 261 aaKnown RBP3.95□□□□□ -1.78
ATM-217ENST00000531957 LIX1LQ8IVB5 337 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 YAF2Q8IY57 180 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 PIGOQ8TEQ8 1089 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 EDC3Q96F86 508 aaKnown RBP3.95□□□□□ -1.78
ATM-217ENST00000531957 APIPQ96GX9 242 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 HIST1H2AAQ96QV6 131 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 SIGLEC11Q96RL6 698 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 DHX36Q9H2U1 1008 aaKnown RBP3.95□□□□□ -1.78
ATM-217ENST00000531957 FOXP1Q9H334 677 aaPredicted RBP3.95□□□□□ -1.78
ATM-217ENST00000531957 TBC1D23Q9NUY8 699 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 DKK4Q9UBT3 224 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 NKX1-2Q9UD57 310 aaPredicted RBP3.95□□□□□ -1.78
ATM-217ENST00000531957 SLC27A6Q9Y2P4 619 aa3.95□□□□□ -1.78
ATM-217ENST00000531957 LY6G6EA0A0G2JKS1 128 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 AQP7P3A6NL99 342 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 F8W8V4 182 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 H3BNC9 293 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 LINC00205P59089 165 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 GPC5P78333 572 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 CFHR1Q03591 330 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 KPNB1Q14974 876 aaKnown RBP3.94□□□□□ -1.78
ATM-217ENST00000531957 C4orf46Q504U0 113 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 DARS2Q6PI48 645 aaKnown RBP3.94□□□□□ -1.78
ATM-217ENST00000531957 VSTM1Q6UX27 236 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 C12orf76Q8N812 135 aaPredicted RBP3.94□□□□□ -1.78
ATM-217ENST00000531957 SMCR8Q8TEV9 937 aaPredicted RBP3.94□□□□□ -1.78
ATM-217ENST00000531957 IGFBPL1Q8WX77 278 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 TSR2Q969E8 191 aaKnown RBP3.94□□□□□ -1.78
ATM-217ENST00000531957 PRR11Q96HE9 360 aaPredicted RBP3.94□□□□□ -1.78
ATM-217ENST00000531957 KAZALD1Q96I82 304 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 APOL5Q9BWW9 433 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 TRIM36Q9NQ86 728 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 PI4KBQ9UBF8 816 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 DNAJB11Q9UBS4 358 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 STEAP1Q9UHE8 339 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 VPS51Q9UID3 782 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 ZNF580Q9UK33 172 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 HPSEQ9Y251 543 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 PCDHGB6Q9Y5F9 930 aa3.94□□□□□ -1.78
ATM-217ENST00000531957 SHROOM4Q9ULL8 1493 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 A8MVJ9 347 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 GOLIM4O00461 696 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 TSPAN6O43657 245 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 MGEA5O60502 916 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 ZBED1O96006 694 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 SNHG28P0DPA3 235 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 CD19P15391 556 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 ADRA1DP25100 572 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 RBL1P28749 1068 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 HTR7P34969 479 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 THBS4P35443 961 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 EIF4A1P60842 406 aaKnown RBP3.93□□□□□ -1.78
ATM-217ENST00000531957 ID2Q02363 134 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 GALEQ14376 348 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 MANEALQ5VSG8 457 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 RRAGBQ5VZM2 374 aa3.93□□□□□ -1.78
ATM-217ENST00000531957 RUSC1-AS1Q66K80 236 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms