RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 RHBDF2Q6PJF5 856 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 HTR3DQ70Z44 454 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 PIGZQ86VD9 579 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 C11orf74Q86VG3 221 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 FAM114A1Q8IWE2 563 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 ZNF276Q8N554 614 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 TSTD1Q8NFU3 115 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 KCNV2Q8TDN2 545 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 RNF139Q8WU17 664 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 SPHK2Q9NRA0 654 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 OLA1Q9NTK5 396 aaKnown RBP13.22□□□□□ -0.29
C11orf54-210ENST00000531516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
C11orf54-210ENST00000531516 RWDD2AQ9UIY3 292 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 TSPAN16Q9UKR8 245 aa13.22□□□□□ -0.29
C11orf54-210ENST00000531516 COL4A3Q01955 1670 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 PRR5-ARHGAP8B1AHC4 643 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 HHLA1C9JL84 531 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 GOLGA6L22H0YM25 854 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 SCAMP3O14828 347 aaKnown RBP13.21□□□□□ -0.29
C11orf54-210ENST00000531516 AXIN1O15169 862 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 HOXC11O43248 304 aaPredicted RBP13.21□□□□□ -0.29
C11orf54-210ENST00000531516 LRP3O75074 770 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 RPP40O75818 363 aaKnown RBP13.21□□□□□ -0.29
C11orf54-210ENST00000531516 ZBED1O96006 694 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 CYBBP04839 570 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 RETP07949 1114 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 CHKAP35790 457 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 ID4P47928 161 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 SEC13P55735 322 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 YWHAGP61981 247 aaKnown RBP eCLIP13.21□□□□□ -0.29
C11orf54-210ENST00000531516 ARHGAP8P85298 464 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 GCNT1Q02742 428 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 KCNH2Q12809 1159 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 DMC1Q14565 340 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 C2orf27AQ580R0 203 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 EOGTQ5NDL2 527 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 SDE2Q6IQ49 451 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 CACNA2D4Q7Z3S7 1137 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 MIB1Q86YT6 1006 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 BBS7Q8IWZ6 715 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 EHBP1Q8NDI1 1231 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 KLF16Q9BXK1 252 aaPredicted RBP13.21□□□□□ -0.29
C11orf54-210ENST00000531516 FBRSL1Q9HCM7 1045 aaKnown RBP13.21□□□□□ -0.29
C11orf54-210ENST00000531516 POLMQ9NP87 494 aaPredicted RBP13.21□□□□□ -0.29
C11orf54-210ENST00000531516 RASAL2Q9UJF2 1139 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 USP3Q9Y6I4 520 aa13.21□□□□□ -0.29
C11orf54-210ENST00000531516 MED7O43513 233 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 TBX18O95935 607 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 KRT5P13647 590 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 OPRD1P41143 372 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 HARS2P49590 506 aaKnown RBP13.2□□□□□ -0.3
C11orf54-210ENST00000531516 DGKEP52429 567 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 MARSP56192 900 aaKnown RBP13.2□□□□□ -0.3
C11orf54-210ENST00000531516 FOXK2Q01167 660 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 EFEMP1Q12805 493 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 BYSLQ13895 437 aaKnown RBP13.2□□□□□ -0.3
C11orf54-210ENST00000531516 ELF2Q15723 593 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 LPAL2Q16609 132 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 USP39Q53GS9 565 aaKnown RBP13.2□□□□□ -0.3
C11orf54-210ENST00000531516 GRAMD4Q6IC98 578 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 TRIM59Q8IWR1 403 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 GAB3Q8WWW8 586 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 LOXL4Q96JB6 756 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 ZFRQ96KR1 1074 aaKnown RBP13.2□□□□□ -0.3
C11orf54-210ENST00000531516 GBP4Q96PP9 640 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 HHIPQ96QV1 700 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 BBS2Q9BXC9 721 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 MARCH2Q9P0N8 246 aa13.2□□□□□ -0.3
C11orf54-210ENST00000531516 PTPRZ1P23471 2315 aaPredicted RBP13.19□□□□□ -0.3
C11orf54-210ENST00000531516 NEDD8-MDP1E9PL57 170 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 M0QYV0 167 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 SART1O43290 800 aaKnown RBP13.19□□□□□ -0.3
C11orf54-210ENST00000531516 HRO43593 1189 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 RHOBTB1O94844 696 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 BMP6P22004 513 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 MTIF2P46199 727 aaKnown RBP13.19□□□□□ -0.3
C11orf54-210ENST00000531516 MFAP3P55082 362 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 KDSRQ06136 332 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 PDE4CQ08493 712 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 CNGA2Q16280 664 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 LCLAT1Q6UWP7 414 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 TTC30AQ86WT1 665 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 DCLK2Q8N568 766 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 NAT16Q8N8M0 369 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 RBBP8NLQ8NC74 664 aaPredicted RBP13.19□□□□□ -0.3
C11orf54-210ENST00000531516 USP33Q8TEY7 942 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 KCTD13Q8WZ19 329 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 TRIM62Q9BVG3 475 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 NUP62CLQ9H1M0 184 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 NMUR1Q9HB89 426 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 CNGB3Q9NQW8 809 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 ABCC13Q9NSE7 274 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
C11orf54-210ENST00000531516 BCCIPQ9P287 314 aaKnown RBP eCLIP13.19□□□□□ -0.3
C11orf54-210ENST00000531516 EBF1Q9UH73 591 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 MMP17Q9ULZ9 603 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 COL4A2P08572 1712 aa13.19□□□□□ -0.3
C11orf54-210ENST00000531516 SLC12A8A0AV02 714 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms