RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 SLC20A1Q8WUM9 679 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 DEPDC1BQ8WUY9 529 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 CPLX3Q8WVH0 158 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 CNTNAP3BQ96NU0 1288 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 CYP2S1Q96SQ9 504 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 AGPAT1Q99943 283 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 TRIM62Q9BVG3 475 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 CNTNAP3Q9BZ76 1288 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 NACA2Q9H009 215 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 NMUR1Q9HB89 426 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCS-206ENST00000530961 MUTYHQ9UIF7 546 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 ARHGAP26Q9UNA1 814 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 SORCS3Q9UPU3 1222 aa16.05■□□□□ 0.16
CCS-206ENST00000530961 NCOR2Q9Y618 2525 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 HEPACAM2A8MVW5 462 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 E5RJQ4 531 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 AP5Z1O43299 807 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 COCHO43405 550 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 RARGP13631 454 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 TCF3P15923 654 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 CASP14P31944 242 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 ATP5C1P36542 298 aaKnown RBP16.04■□□□□ 0.16
CCS-206ENST00000530961 VIPR2P41587 438 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 PGFP49763 221 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 KLHL30Q0D2K2 578 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 BSPRYQ5W0U4 402 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 BTBD8Q5XKL5 378 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 ERICH1Q86X53 443 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 MFSD6LQ8IWD5 586 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 SCUBE3Q8IX30 993 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 KIAA1958Q8N8K9 716 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 RSAD2Q8WXG1 361 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 USP13Q92995 863 aaPredicted RBP16.04■□□□□ 0.16
CCS-206ENST00000530961 MRFAP1L1Q96HT8 127 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 SLC22A12Q96S37 553 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 CPXM1Q96SM3 734 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 RPP25Q9BUL9 199 aaKnown RBP16.04■□□□□ 0.16
CCS-206ENST00000530961 RNF38Q9H0F5 515 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 SYNCQ9H7C4 482 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 ABCC13Q9NSE7 274 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 OSER1Q9NX31 292 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 DNMT3LQ9UJW3 386 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 TECTAO75443 2155 aa16.04■□□□□ 0.16
CCS-206ENST00000530961 YJEFN3A6XGL0 299 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 E7ENQ6 273 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 PIK3R2O00459 728 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 PAPSS1O43252 624 aaPredicted RBP16.03■□□□□ 0.16
CCS-206ENST00000530961 PRAMEF12O95522 483 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 GLI1P08151 1106 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 MBL2P11226 248 aaPredicted RBP16.03■□□□□ 0.16
CCS-206ENST00000530961 PSMC3P17980 439 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 TNFAIP3P21580 790 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 GABRB2P47870 512 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 ZNF75DP51815 510 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 NOMO3P69849 1222 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 TSR1Q2NL82 804 aaKnown RBP16.03■□□□□ 0.16
CCS-206ENST00000530961 C10orf120Q5SQS8 335 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 NAA35Q5VZE5 725 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 PPP1R2P3Q6NXS1 205 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 TRIM67Q6ZTA4 783 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 BEND5Q7L4P6 421 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 BHLHA9Q7RTU4 235 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 DGLUCYQ7Z3D6 616 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 DDX42Q86XP3 938 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCS-206ENST00000530961 GPIHBP1Q8IV16 184 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 DRC7Q8IY82 874 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 UBALD2Q8IYN6 164 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 OR8K1Q8NGG5 319 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 BPIFB1Q8TDL5 484 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 NDRG1Q92597 394 aaKnown RBP16.03■□□□□ 0.16
CCS-206ENST00000530961 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 KXD1Q9BQD3 176 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 SYT11Q9BT88 431 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 TRMT61BQ9BVS5 477 aaKnown RBP16.03■□□□□ 0.16
CCS-206ENST00000530961 HAUS4Q9H6D7 363 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 CCSER2Q9H7U1 834 aa16.03■□□□□ 0.16
CCS-206ENST00000530961 OLA1Q9NTK5 396 aaKnown RBP16.03■□□□□ 0.16
CCS-206ENST00000530961 THG1LQ9NWX6 298 aaKnown RBP16.03■□□□□ 0.16
CCS-206ENST00000530961 CHD6Q8TD26 2715 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 SERPING1P05155 500 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 UNGP13051 313 aaPredicted RBP16.02■□□□□ 0.16
CCS-206ENST00000530961 HNRNPH3P31942 346 aaKnown RBP16.02■□□□□ 0.16
CCS-206ENST00000530961 FCHO2Q0JRZ9 810 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 CLEC16AQ2KHT3 1053 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 PTPN20Q4JDL3 420 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 EFHC1Q5JVL4 640 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 VITQ6UXI7 678 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 TOGARAM2Q6ZUX3 1019 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 RSRC2Q7L4I2 434 aaKnown RBP16.02■□□□□ 0.16
CCS-206ENST00000530961 YAF2Q8IY57 180 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 RNF139Q8WU17 664 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 CPA5Q8WXQ8 436 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 PCDHB18PQ96TA0 734 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 PLA2G2FQ9BZM2 168 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 SMG9Q9H0W8 520 aaKnown RBP16.02■□□□□ 0.16
CCS-206ENST00000530961 SEPT11Q9NVA2 429 aaKnown RBP16.02■□□□□ 0.16
CCS-206ENST00000530961 ASNSD1Q9NWL6 643 aa16.02■□□□□ 0.16
CCS-206ENST00000530961 CCL26Q9Y258 94 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms