RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 DEFB118Q96PH6 123 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 XPO6Q96QU8 1125 aaKnown RBP8.73□□□□□ -1.01
CTNND1-225ENST00000530094 ERP44Q9BS26 406 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 PRRG3Q9BZD7 231 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 CLPBQ9H078 707 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 CARD9Q9H257 536 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 LRRC40Q9H9A6 602 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 MAGEB16A2A368 324 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 M0R3G1 203 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 CYTH3O43739 400 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 CKMP06732 381 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 DNAJB2P25686 324 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 CARSP49589 748 aaKnown RBP8.73□□□□□ -1.01
CTNND1-225ENST00000530094 ITGA8P53708 1063 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 NTRK3Q16288 839 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 GJC2Q5T442 439 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-225ENST00000530094 SPRYD7Q5W111 196 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 ADCK1Q86TW2 530 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 ZNF410Q86VK4 478 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 TEX9Q8N6V9 391 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 C1orf131Q8NDD1 294 aaKnown RBP8.73□□□□□ -1.01
CTNND1-225ENST00000530094 REPS2Q8NFH8 660 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 KCNB2Q92953 911 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 APBA2Q99767 749 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 RPS6KB2Q9UBS0 482 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 PLA2G4CQ9UP65 541 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 PCDHB5Q9Y5E4 795 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 NR2E3Q9Y5X4 410 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 ALG6Q9Y672 507 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 ADGRA2Q96PE1 1338 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 TMEM150BA6NC51 233 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 SDR42E2A6NKP2 422 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 CAND2O75155 1236 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 TGM2P21980 687 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 PTPN3P26045 913 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 PRIM2P49643 509 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 USP38Q8NB14 1042 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 PI4K2AQ9BTU6 479 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 WDR47O94967 919 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 RBP1P09455 135 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 CHN1P15882 459 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 SLC9A1P19634 815 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 NPTX2P47972 431 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 RHOAP61586 193 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 ZNF507Q8TCN5 953 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 TRIM51Q9BSJ1 452 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 MANSC1Q9H8J5 431 aa8.73□□□□□ -1.01
CTNND1-225ENST00000530094 PPP1R37O75864 691 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 PYGMP11217 842 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 GZMAP12544 262 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 RRM2P31350 389 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 CLEC16AQ2KHT3 1053 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 FAM71DQ8N9W8 422 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 DIS3LQ8TF46 1054 aaKnown RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 SH3GL1Q99961 368 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 ZSWIM1Q9BR11 485 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 C1QTNF7Q9BXJ2 289 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 DCLK3Q9C098 648 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 ILKAPQ9H0C8 392 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 AHSPQ9NZD4 102 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 TBKBP1A7MCY6 615 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 MSCO60682 206 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 RPN2P04844 631 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 ENO3P13929 434 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 DARSP14868 501 aaKnown RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 ACO1P21399 889 aaKnown RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 LAMTOR4Q0VGL1 99 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 RAD18Q9NS91 495 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 IFRD1O00458 451 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 PEX10O60683 326 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 SKP1P63208 163 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 KDSRQ06136 332 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 RETSATQ6NUM9 610 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 DDI1Q8WTU0 396 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 ANKS1AQ92625 1134 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 ZNF333Q96JL9 665 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 L3MBTL3Q96JM7 780 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 NPHS2Q9NP85 383 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 VPS28Q9UK41 221 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 EIF3HO15372 352 aaKnown RBP eCLIP8.72□□□□□ -1.012e-7■■□□□ 12
CTNND1-225ENST00000530094 CYP2A6P11509 494 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 KRT20P35900 424 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 CHI3L1P36222 383 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 FMR1Q06787 632 aaKnown RBP eCLIP8.72□□□□□ -1.011e-6■■■■□ 23.3
CTNND1-225ENST00000530094 TERF2Q15554 542 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 LONRF1Q17RB8 773 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 TFDP3Q5H9I0 405 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 CHMP1BQ7LBR1 199 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 SLC13A5Q86YT5 568 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 BLOC1S5Q8TDH9 187 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 SPIRE2Q8WWL2 714 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 CASP10Q92851 521 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 TMEM176AQ96HP8 235 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 NFKBIZQ9BYH8 718 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 STK39Q9UEW8 545 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 NCKAP1Q9Y2A7 1128 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 SHPRHQ149N8 1683 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 A0A0A6YYK5 440 aaPredicted RBP8.72□□□□□ -1.01
CTNND1-225ENST00000530094 GOLGA8RI6L899 631 aa8.72□□□□□ -1.01
CTNND1-225ENST00000530094 LGALS2P05162 132 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms