RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 MTCL1Q9Y4B5 1905 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 PLXNA3P51805 1871 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 A0A1W2PRU2 124 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 GTPBP10A4D1E9 387 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 SMTNL1A8MU46 457 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 LOC730098B7Z3J9 87 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 CILPO75339 1184 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 SOAT2O75908 522 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 USP17L7P0C7H9 530 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 SLC9A1P19634 815 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 TBXAS1P24557 533 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 CYP2F1P24903 491 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 MAGEA11P43364 429 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 ZNF165P49910 485 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 EPHB3P54753 998 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 LRMPQ12912 555 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 PLD1Q13393 1074 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 TMED1Q13445 227 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 CUL2Q13617 745 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 CCDC142Q17RM4 750 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 ZSCAN23Q3MJ62 389 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 FILIP1LQ4L180 1135 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 MDH1BQ5I0G3 518 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 MIIPQ5JXC2 388 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 IQCEQ6IPM2 695 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 BRICD5Q6PL45 260 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 VSTM1Q6UX27 236 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 SCARA5Q6ZMJ2 495 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 GBP6Q6ZN66 633 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 C4orf50Q6ZRC1 276 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 PAQR9Q6ZVX9 377 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 DNAJB7Q7Z6W7 309 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 ACOT1Q86TX2 421 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 SPATA2LQ8IUW3 424 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 RELL1Q8IUW5 271 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 ADHFE1Q8IWW8 467 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 GOLGA6L1Q8N7Z2 621 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 B3GALNT2Q8NCR0 500 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 UHMK1Q8TAS1 419 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 PSMG2Q969U7 264 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 CENPTQ96BT3 561 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 NT5C1BQ96P26 610 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 TWNKQ96RR1 684 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 LPIN3Q9BQK8 851 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 NT5C1AQ9BXI3 368 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 LRRC3Q9BY71 257 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 B3GNT5Q9BYG0 378 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 HSD3B7Q9H2F3 369 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 CD248Q9HCU0 757 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 AVENQ9NQS1 362 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 CISHQ9NSE2 258 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 HCFC1R1Q9NWW0 138 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 ABI2Q9NYB9 513 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 IP6K2Q9UHH9 426 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 YIPF1Q9Y548 306 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 ASB3Q9Y575 518 aa6.63□□□□□ -1.35
ATPAF1-209ENST00000529214 VCANP13611 3396 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 ALG1L2C9J202 215 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 CPNE3O75131 537 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 MICAL2O94851 1124 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 CAVIN2O95810 425 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 RHOP08100 348 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 ZNF18P17022 549 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 ATF6P18850 670 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 CD58P19256 250 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 ACO1P21399 889 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 PON1P27169 355 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 GRIK1P39086 918 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 RAD23BP54727 409 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 EPHA5P54756 1037 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 EPHA4P54764 986 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 RPL10AP62906 217 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 NTHL1P78549 312 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 CYP27A1Q02318 531 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 GCNT1Q02742 428 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 ZP2Q05996 745 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 GABPB1Q06547 395 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 KCNMA1Q12791 1236 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 COL9A2Q14055 689 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 HLTFQ14527 1009 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 IQCB1Q15051 598 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 KRT31Q15323 416 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 TCEA2Q15560 299 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 DDR2Q16832 855 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 EXOC3L4Q17RC7 722 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 PABPC1LQ4VXU2 614 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 C2orf27AQ580R0 203 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 CYP4A22Q5TCH4 519 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 TRIM65Q6PJ69 517 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 RRAGAQ7L523 313 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 DHX40Q8IX18 779 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 ELMOD1Q8N336 334 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 PPM1KQ8N3J5 372 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 AOPEPQ8N6M6 819 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 PAF1Q8N7H5 531 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 UBR7Q8N806 425 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 KIAA1958Q8N8K9 716 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 C12orf29Q8N999 325 aa6.62□□□□□ -1.35
ATPAF1-209ENST00000529214 MYLPFQ96A32 169 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms