RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	GJB7	Q6PEY0	223 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	CREBRF	Q8IUR6	639 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	ZNF276	Q8N554	614 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	SUMF1	Q8NBK3	374 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	ATRIP	Q8WXE1	791 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	NDRG1	Q92597	394 aa	Known RBP	12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	EXOC4	Q96A65	974 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	OTUB2	Q96DC9	234 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	ULBP1	Q9BZM6	244 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	THAP9	Q9H5L6	903 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	POLR3B	Q9NW08	1133 aa	Predicted RBP	12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	CLIC5	Q9NZA1	410 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	DNMT3L	Q9UJW3	386 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	CNTN6	Q9UQ52	1028 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	GREB1	Q4ZG55	1949 aa		12.36	□□□□□ -0.43
PSMC3-205	ENST00000528362	RIF1	Q5UIP0	2472 aa	Known RBP	12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	WDR87	Q6ZQQ6	2873 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	CHURC1-FNTB	B4DL54	471 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362		M0QYV0	167 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	HOXC11	O43248	304 aa	Predicted RBP	12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	GABBR2	O75899	941 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	ZBED1	O96006	694 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	RALA	P11233	206 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	MTIF2	P46199	727 aa	Known RBP	12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	NRL	P54845	237 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	YWHAG	P61981	247 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	APBA1	Q02410	837 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	ADIG	Q0VDE8	80 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	CNGA2	Q16280	664 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	TRIM65	Q6PJ69	517 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362		Q6ZNB5	142 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	RBM43	Q6ZSC3	357 aa	Known RBP	12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	HTR3D	Q70Z44	454 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	TADA2B	Q86TJ2	420 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	TMEM25	Q86YD3	366 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	MIB1	Q86YT6	1006 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	SFTPA1	Q8IWL2	248 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	ETFBKMT	Q8IXQ9	262 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	ARHGAP18	Q8N392	663 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	SLC35F5	Q8WV83	523 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	KCTD13	Q8WZ19	329 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	SECISBP2L	Q93073	1101 aa	Known RBP	12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	LRRC4	Q9HBW1	653 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	DACH1	Q9UI36	760 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	GVINP1	Q7Z2Y8	2422 aa		12.35	□□□□□ -0.43
PSMC3-205	ENST00000528362	GTPBP10	A4D1E9	387 aa	Known RBP	12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	ANTXRL	A6NF34	631 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362		K7EQS6	105 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	STC2	O76061	302 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	CHRM1	P11229	460 aa	Predicted RBP	12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	KRT5	P13647	590 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	SLC9A1	P19634	815 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	HOXA6	P31267	233 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	EIF2D	P41214	584 aa	Known RBP	12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	SLC6A11	P48066	632 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	FNTB	P49356	437 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	RGS7	P49802	495 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	GOLGA8F	Q08AF8	430 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	GOLGA8DP	Q0D2H9	430 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	STIL	Q15468	1287 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	MAN2A1	Q16706	1144 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	TPD52L1	Q16890	204 aa	Predicted RBP	12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	EXOC3L4	Q17RC7	722 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	HSP90AA4P	Q58FG1	418 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	PMF1	Q6P1K2	205 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	GBP6	Q6ZN66	633 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	PHTF2	Q8N3S3	785 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	RPLP0P6	Q8NHW5	317 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	EPC1	Q9H2F5	836 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	SPHK2	Q9NRA0	654 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	RASAL2	Q9UJF2	1139 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	LSM7	Q9UK45	103 aa	Known RBP	12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	DENND4C	Q5VZ89	1909 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	ANAPC1	Q9H1A4	1944 aa		12.34	□□□□□ -0.43
PSMC3-205	ENST00000528362	PTPRZ1	P23471	2315 aa	Predicted RBP	12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	MIA3	Q5JRA6	1907 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	YJEFN3	A6XGL0	299 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	BECN2	A8MW95	431 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362		E7ENQ6	273 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	ATG13	O75143	517 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	KLKB1	P03952	638 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	PON1	P27169	355 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	MFAP3	P55082	362 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	SEC13	P55735	322 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	GAD2	Q05329	585 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	KDSR	Q06136	332 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	EFEMP1	Q12805	493 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	MIIP	Q5JXC2	388 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	HEATR6	Q6AI08	1181 aa	Known RBP	12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	RSRC2	Q7L4I2	434 aa	Known RBP	12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	ENOSF1	Q7L5Y1	443 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	FAM114A1	Q8IWE2	563 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	SIX6OS1	Q8N1H7	587 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	SCML4	Q8N228	414 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	USP33	Q8TEY7	942 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	PNKP	Q96T60	521 aa		12.33	□□□□□ -0.44
PSMC3-205	ENST00000528362	SIX2	Q9NPC8	291 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms