RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 CFBP00751 764 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 FGFR3P22607 806 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 SERPINB5P36952 375 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 PPP4CP60510 307 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 SLC15A2Q16348 729 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 TFDP3Q5H9I0 405 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 PADI6Q6TGC4 694 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 KBTBD6Q86V97 674 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 SLC9A9Q8IVB4 645 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 DDX1Q92499 740 aaKnown RBP12.93□□□□□ -0.34
TSKU-203ENST00000527881 TMEM79Q9BSE2 394 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 TRPC7Q9HCX4 862 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 ITGA11Q9UKX5 1188 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.93□□□□□ -0.34
TSKU-203ENST00000527881 F8VP50 259 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 ENO3P13929 434 aaPredicted RBP12.93□□□□□ -0.34
TSKU-203ENST00000527881 PTP4A2Q12974 167 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 FASTKD1Q53R41 847 aaKnown RBP12.93□□□□□ -0.34
TSKU-203ENST00000527881 WDR44Q5JSH3 913 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 C1orf220Q5T0J3 134 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 XKR5Q6UX68 686 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 MCEEQ96PE7 176 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 RTFDC1Q9BY42 306 aaPredicted RBP12.93□□□□□ -0.34
TSKU-203ENST00000527881 IP6K2Q9UHH9 426 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 SORCS3Q9UPU3 1222 aa12.93□□□□□ -0.34
TSKU-203ENST00000527881 K7EPI3 171 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 KRT38O76015 456 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 HSPA13P48723 471 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 ADGRE1Q14246 886 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 KCNT1Q5JUK3 1230 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 CES4AQ5XG92 561 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 FBXO11Q86XK2 927 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 BHLHE22Q8NFJ8 381 aaPredicted RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 ZSCAN18Q8TBC5 510 aaPredicted RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 FEZF2Q8TBJ5 459 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 LENG9Q96B70 501 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 PPP1R10Q96QC0 940 aaKnown RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 FIZ1Q96SL8 496 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 CDRT15Q96T59 188 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 P2RX7Q99572 595 aaKnown RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 HEPHQ9BQS7 1158 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 LXNQ9BS40 222 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 DHRS4Q9BTZ2 278 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 AMNQ9BXJ7 453 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 DRC3Q9H069 523 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 TUFT1Q9NNX1 390 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 DRG1Q9Y295 367 aaKnown RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 PCDHB4Q9Y5E5 795 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 PCDHB2Q9Y5E7 798 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 KDM1AO60341 852 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 SEC24DO94855 1032 aaPredicted RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 ITGAVP06756 1048 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 UNGP13051 313 aaPredicted RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 DSG3P32926 999 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 ECE1P42892 770 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 PHKA2P46019 1235 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 BCAP31P51572 246 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 PEX3P56589 373 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 TGFBIQ15582 683 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 TXNRD3NBQ6F5E7 133 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 THOC7Q6I9Y2 204 aaKnown RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 PTAR1Q7Z6K3 402 aaPredicted RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 PHTF2Q8N3S3 785 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 GRIN3AQ8TCU5 1115 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 FAF2Q96CS3 445 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 RMND5BQ96G75 393 aaPredicted RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 SETDB2Q96T68 719 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 HNRNPABQ99729 332 aaKnown RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 EIF2AQ9BY44 585 aaKnown RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 NDEL1Q9GZM8 345 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 PNPOQ9NVS9 261 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 ZC3H7BQ9UGR2 993 aaKnown RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 EBF1Q9UH73 591 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 BCAP29Q9UHQ4 241 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 MYRFQ9Y2G1 1151 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 UBR2Q8IWV8 1755 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 E2F8A0AVK6 867 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 CSPG5O95196 566 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 CFHP08603 1231 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 SLC1A6P48664 564 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 KPNA1P52294 538 aaPredicted RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 PLEKHA7Q6IQ23 1121 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 PPP1R2P3Q6NXS1 205 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 TMEM270Q6UE05 265 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 HAUS6Q7Z4H7 955 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 RFX6Q8HWS3 928 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 HSD17B14Q9BPX1 270 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 WDR83Q9BRX9 315 aaKnown RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 GCOM2Q9BZD3 368 aaPredicted RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 TRPV6Q9H1D0 765 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 EPS15L1Q9UBC2 864 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 GPC6Q9Y625 555 aaPredicted RBP12.92□□□□□ -0.34
TSKU-203ENST00000527881 NUP98P52948 1817 aa12.92□□□□□ -0.34
TSKU-203ENST00000527881 UGT1A9O60656 530 aa12.91□□□□□ -0.34
TSKU-203ENST00000527881 BPGMP07738 259 aa12.91□□□□□ -0.34
TSKU-203ENST00000527881 MCF2P10911 925 aa12.91□□□□□ -0.34
TSKU-203ENST00000527881 COX4I1P13073 169 aa12.91□□□□□ -0.34
TSKU-203ENST00000527881 PCYT1AP49585 367 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms