RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 DUSP9Q99956 384 aaKnown RBP25.35■■□□□ 1.65
USP47-205ENST00000525257 GTPBP2Q9BX10 602 aaKnown RBP25.35■■□□□ 1.65
USP47-205ENST00000525257 DNAJC17Q9NVM6 304 aaKnown RBP25.35■■□□□ 1.65
USP47-205ENST00000525257 COMMD8Q9NX08 183 aa25.35■■□□□ 1.65
USP47-205ENST00000525257 CACNA1EQ15878 2313 aa25.35■■□□□ 1.65
USP47-205ENST00000525257 TLR5O60602 858 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 BEST1O76090 585 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 VNN1O95497 513 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 YEATS4O95619 227 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 NTSR1P30989 418 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 AFMP43652 599 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 CUL4BQ13620 913 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 FOXD4L5Q5VV16 416 aaPredicted RBP25.34■■□□□ 1.65
USP47-205ENST00000525257 EGFLAMQ63HQ2 1017 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 GRAMD4Q6IC98 578 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 SLC2A14Q8TDB8 520 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 PARD3BQ8TEW8 1205 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 FOXD4L4Q8WXT5 416 aaPredicted RBP25.34■■□□□ 1.65
USP47-205ENST00000525257 GATA6Q92908 595 aa25.34■■□□□ 1.65
USP47-205ENST00000525257 NEDD8-MDP1E9PL57 170 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 TBX18O95935 607 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 C4BPAP04003 597 aaKnown RBP25.33■■□□□ 1.65
USP47-205ENST00000525257 HOXD12P35452 270 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 AP3M2P53677 418 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 ATXN3P54252 364 aaPredicted RBP25.33■■□□□ 1.65
USP47-205ENST00000525257 MAP3K7CLP57077 242 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 DUOXA1Q1HG43 343 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 SLC36A4Q6YBV0 504 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 FAM49BQ9NUQ9 324 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 HMGXB4Q9UGU5 601 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 SLC6A14Q9UN76 642 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 ZFYVE26Q68DK2 2539 aa25.33■■□□□ 1.65
USP47-205ENST00000525257 SPAARA0A1B0GVQ0 90 aa25.32■■□□□ 1.64
USP47-205ENST00000525257 A0A1W2PQF6 199 aa25.32■■□□□ 1.64
USP47-205ENST00000525257 HYAL3O43820 417 aaPredicted RBP25.32■■□□□ 1.64
USP47-205ENST00000525257 FOXD4L6Q3SYB3 417 aaPredicted RBP25.32■■□□□ 1.64
USP47-205ENST00000525257 FOXD4L3Q6VB84 417 aaPredicted RBP25.32■■□□□ 1.64
USP47-205ENST00000525257 GRAMD1CQ8IYS0 662 aa25.32■■□□□ 1.64
USP47-205ENST00000525257 GOLGA5Q8TBA6 731 aa25.32■■□□□ 1.64
USP47-205ENST00000525257 ACOX2Q99424 681 aa25.32■■□□□ 1.64
USP47-205ENST00000525257 TLR8Q9NR97 1041 aaKnown RBP25.32■■□□□ 1.64
USP47-205ENST00000525257 STARD13Q9Y3M8 1113 aa25.32■■□□□ 1.64
USP47-205ENST00000525257 IGHV1OR15-9A0A0B4J2B8 117 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 PVALEFA0A1B0GWK0 134 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 K7ELQ4 463 aaPredicted RBP25.31■■□□□ 1.64
USP47-205ENST00000525257 GREM1O60565 184 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 CENPBP07199 599 aaPredicted RBP25.31■■□□□ 1.64
USP47-205ENST00000525257 P4HA1P13674 534 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 NDST1P52848 882 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 DLG4P78352 724 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 CLDN10P78369 228 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 SIM1P81133 766 aaPredicted RBP25.31■■□□□ 1.64
USP47-205ENST00000525257 GFPT1Q06210 699 aaPredicted RBP25.31■■□□□ 1.64
USP47-205ENST00000525257 ZNF33AQ06730 810 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 SEMA3BQ13214 749 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 TPGS1Q6ZTW0 290 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 HTR3DQ70Z44 454 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 PIP4P1Q86T03 277 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 CHPFQ8IZ52 775 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 HDDC3Q8N4P3 179 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 C12orf29Q8N999 325 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 CEP76Q8TAP6 659 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 JAKMIP2Q96AA8 810 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 BBS2Q9BXC9 721 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 KLF16Q9BXK1 252 aaPredicted RBP25.31■■□□□ 1.64
USP47-205ENST00000525257 FBXO44Q9H4M3 255 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 CYP8B1Q9UNU6 501 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 PCDH15Q96QU1 1955 aa25.31■■□□□ 1.64
USP47-205ENST00000525257 PCNX2A6NKB5 2137 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 TMEM8BA6NDV4 472 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 SERPINF2P08697 491 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 TYRP14679 529 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 NDUFV2P19404 249 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 ADORA2BP29275 332 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 SDE2Q6IQ49 451 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 TOGARAM2Q6ZUX3 1019 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 GPRIN1Q7Z2K8 1008 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 XPO6Q96QU8 1125 aaKnown RBP25.3■■□□□ 1.64
USP47-205ENST00000525257 CAPN10Q9HC96 672 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 CSNK1G1Q9HCP0 422 aa25.3■■□□□ 1.64
USP47-205ENST00000525257 PKD1L2Q7Z442 2459 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 ZBTB24O43167 697 aaPredicted RBP25.29■■□□□ 1.64
USP47-205ENST00000525257 CYP26A1O43174 497 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 CACNG3O60359 315 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 SPOPLQ6IQ16 392 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 SLC41A1Q8IVJ1 513 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 CRYBG2Q8N1P7 616 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 OR2I1PQ8NGU4 316 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 IPO4Q8TEX9 1081 aaKnown RBP25.29■■□□□ 1.64
USP47-205ENST00000525257 CD248Q9HCU0 757 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 OSER1Q9NX31 292 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 FAM13BQ9NYF5 915 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 LSM7Q9UK45 103 aaKnown RBP25.29■■□□□ 1.64
USP47-205ENST00000525257 KLK13Q9UKR3 277 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 RAD54BQ9Y620 910 aa25.29■■□□□ 1.64
USP47-205ENST00000525257 UPK3BL1B0FP48 263 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 PRRT4C9JH25 899 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 UPK3BL2E5RIL1 263 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 OPHN1O60890 802 aa25.28■■□□□ 1.64
USP47-205ENST00000525257 FAM200BP0CF97 657 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms