RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SMIM24O75264 130 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 ATP5HO75947 161 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 LRG1P02750 347 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 MMP3P08254 477 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 DEFB115Q30KQ5 88 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 KDM7AQ6ZMT4 941 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 TFAP2DQ7Z6R9 452 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 ANKRD23Q86SG2 305 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 LRRC34Q8IZ02 419 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 FGD4Q96M96 766 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 SERPINI1Q99574 410 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 NIFKQ9BYG3 293 aaKnown RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 KANSL3Q9P2N6 904 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 NCANO14594 1321 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 SDR42E2A6NKP2 422 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 SIGLEC16A6NMB1 481 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 URODP06132 367 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 ELNP15502 786 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 ALDH18A1P54886 795 aaKnown RBP13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 KDSRQ06136 332 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 ZNF177Q13360 481 aaPredicted RBP13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 CDH18Q13634 790 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 NBPF20Q3BBV1 942 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 PIGZQ86VD9 579 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 PACS2Q86VP3 889 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 DDIASQ8IXT1 998 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 KATNAL2Q8IYT4 538 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 COLGALT1Q8NBJ5 622 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 FAM161BQ96MY7 647 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 PAFAH2Q99487 392 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 TRPM5Q9NZQ8 1165 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 PCDHB5Q9Y5E4 795 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 ZNF536O15090 1300 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 H0Y626 953 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 DNALI1O14645 258 aaPredicted RBP13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 FAM107AO95990 144 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 ARL2P36404 184 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 ACTN3Q08043 901 aaPredicted RBP13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 RFX8Q6ZV50 586 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 CCDC124Q96CT7 223 aaKnown RBP13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 ERP27Q96DN0 273 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 GOLGA2P5Q9HBQ8 144 aa13.52□□□□□ -0.24
PCDHGB1-201ENST00000523390 LTFP02788 710 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 MBL2P11226 248 aaPredicted RBP13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 AMPD2Q01433 879 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 IL1RL1Q01638 556 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 ELAVL2Q12926 359 aaKnown RBP13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 KRT33BQ14525 404 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 SLC39A12Q504Y0 691 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 FAM183BPQ6ZVS7 135 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 DDX53Q86TM3 631 aaKnown RBP13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 UNC93AQ86WB7 457 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZDHHC17Q8IUH5 632 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 AENQ8WTP8 325 aaKnown RBP13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 ST6GALNAC4Q9H4F1 302 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 FANCGO15287 622 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 KDELR1P24390 212 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 SSTR1P30872 391 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 CCR1P32246 355 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 NOL9Q5SY16 702 aaKnown RBP13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 KCNT2Q6UVM3 1135 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 PRELID2Q8N945 189 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 C18orf25Q96B23 403 aaPredicted RBP13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 TTYH3Q9C0H2 523 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 NMRK2Q9NPI5 230 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 TRIM33Q9UPN9 1127 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 SHOC2Q9UQ13 582 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 USH1CQ9Y6N9 552 aa13.52□□□□□ -0.25
PCDHGB1-201ENST00000523390 NUP188Q5SRE5 1749 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 NUP98P52948 1817 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 MYBL2P10244 700 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 ELK3P41970 407 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 OVGP1Q12889 678 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 NOGQ13253 232 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 GRAMD1BQ3KR37 738 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZNF662Q6ZS27 426 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 GPR63Q9BZJ6 419 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 SMPD4Q9NXE4 827 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 GRID1Q9ULK0 1009 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 TREHO43280 583 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 GRM5P41594 1212 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 BMPR2Q13873 1038 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 C1orf146Q5VVC0 180 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 APTXQ7Z2E3 356 aaKnown RBP13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 TMC7Q7Z402 723 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 LINC00523Q86TU6 105 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 HELQQ8TDG4 1101 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 SDCCAG3Q96C92 435 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 CINPQ9BW66 212 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 AAASQ9NRG9 546 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 GPR25O00155 361 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 CASQ2O14958 399 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 RIPK2O43353 540 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 CCDC22O60826 627 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 RAG1P15918 1043 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 CRYBB1P53674 252 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 GEMP55040 296 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 MRPS31Q92665 395 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms