RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 NAT16Q8N8M0 369 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 KCNB2Q92953 911 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 POM121Q96HA1 1249 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 HIC2Q96JB3 615 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 IFT74Q96LB3 600 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 PKMYT1Q99640 499 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 GABRG3Q99928 467 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 GPR174Q9BXC1 333 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 TUFT1Q9NNX1 390 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 TMPRSS4Q9NRS4 437 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 STARD13Q9Y3M8 1113 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 SNX11Q9Y5W9 270 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 RAD54BQ9Y620 910 aa9.53□□□□□ -0.88
TRAPPC9-212ENST00000521944 ARHGEF35A5YM69 484 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 METTL12A8MUP2 240 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 WASH3PC4AMC7 463 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 CYB561D2O14569 222 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 TRAK2O60296 914 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 TULP3O75386 442 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 TOM1L1O75674 476 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 NFICP08651 508 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 GP1BBP13224 206 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 NCAM1P13591 858 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 CD6P30203 668 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 MCL1Q07820 350 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 SMARCB1Q12824 385 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 MAPK7Q13164 816 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 DNAJC3Q13217 504 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 AAMPQ13685 434 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 NOLC1Q14978 699 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 ENOX2Q16206 610 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 LY6G5CQ5SRR4 150 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 DCAF12L1Q5VU92 463 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 LAYNQ6UX15 382 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 PRICKLE2Q7Z3G6 844 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 TRIM22Q8IYM9 498 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 KIFAP3Q92845 792 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 NAF1Q96HR8 494 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 NAP1L4Q99733 375 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 KCNK4Q9NYG8 393 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 USP36Q9P275 1121 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 EIF2B4Q9UI10 523 aaKnown RBP9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 PCDHB5Q9Y5E4 795 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 PCDHB11Q9Y5F2 797 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 PCDHGA1Q9Y5H4 931 aa9.52□□□□□ -0.89
TRAPPC9-212ENST00000521944 H0Y8X5 98 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 OLFM2O95897 454 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 CLTAP09496 248 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 ADH5P11766 374 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 RPA1P27694 616 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 GRK6P43250 576 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 SLC7A9P82251 487 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 CBLBQ13191 982 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 KCNB1Q14721 858 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 SUZ12Q15022 739 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 SF3A1Q15459 793 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 C10orf76Q5T2E6 689 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 HES3Q5TGS1 186 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 SCARA3Q6AZY7 606 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 KIAA1958Q8N8K9 716 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 EXD3Q8N9H8 876 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 CADM4Q8NFZ8 388 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 TRIM9Q9C026 710 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 MKRN2Q9H000 416 aaKnown RBP9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 BHMT2Q9H2M3 363 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 CYLDQ9NQC7 956 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 ITM2CQ9NQX7 267 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 SMPD4Q9NXE4 827 aa9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 UXTQ9UBK9 157 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC9-212ENST00000521944 MEI4A8MW99 385 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 PRRT4C9JH25 899 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 SLC16A4O15374 487 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 HCRTO43612 131 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 LILRA1O75019 489 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 RPS6KB1P23443 525 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 ACADVLP49748 655 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 TMPRSS3P57727 454 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 NFKB2Q00653 900 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 IL9RQ01113 521 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 TOB2Q14106 344 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 KRT32Q14532 448 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 KIAA1614Q5VZ46 1190 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 JADE1Q6IE81 842 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 TRMT11Q7Z4G4 463 aaKnown RBP9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 TMEM25Q86YD3 366 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 TERB1Q8NA31 727 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 WBP2Q969T9 261 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 JAKMIP1Q96N16 626 aaKnown RBP9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 PYM1Q9BRP8 204 aaKnown RBP9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 NTPCRQ9BSD7 190 aaKnown RBP9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 CCSER1Q9C0I3 900 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 HSPBP1Q9NZL4 362 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 CFAP97Q9P2B7 532 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 FTSJ1Q9UET6 329 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 ANKRD6Q9Y2G4 727 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 CPQQ9Y646 472 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 CACNA1DQ01668 2161 aa9.5□□□□□ -0.89
TRAPPC9-212ENST00000521944 SETD2Q9BYW2 2564 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms