RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 SPOCD1Q6ZMY3 1216 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 BBS12Q6ZW61 710 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 SAPCD2Q86UD0 394 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 DDX42Q86XP3 938 aaKnown RBP eCLIP7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 HACE1Q8IYU2 909 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 CRYBG2Q8N1P7 616 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 FBXO25Q8TCJ0 367 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 TEKT4Q8WW24 435 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 CPB2Q96IY4 423 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 MCEEQ96PE7 176 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 TBCBQ99426 244 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 CNPY3Q9BT09 278 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 TRIM7Q9C029 511 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 DPH5Q9H2P9 285 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 SMYD3Q9H7B4 428 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 CNOT10Q9H9A5 744 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 PPCSQ9HAB8 311 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 PRDM16Q9HAZ2 1276 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 CHST12Q9NRB3 414 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 SETD4Q9NVD3 440 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 ASNSD1Q9NWL6 643 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 CWC15Q9P013 229 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 CALCOCO1Q9P1Z2 691 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 CPA4Q9UI42 421 aa7.03□□□□□ -1.28
CTNNA1-228ENST00000521640 TCRBV7S2A1N4TA0A589 114 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 M0QYV0 167 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 M0QZ92 97 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 TNPO2O14787 897 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CA12O43570 354 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 LIASO43766 372 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 LRCH4O75427 683 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 RNF8O76064 485 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 RECQL4O94761 1208 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ENDOD1O94919 500 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CALCAP01258 141 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 KRT14P02533 472 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ITGB2P05107 769 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ABHD2P08910 425 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 NPR3P17342 541 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 NR1D1P20393 614 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 PSMA2P25787 234 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 IVDP26440 423 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ATP5DP30049 168 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ACADSBP45954 432 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 NDST1P52848 882 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 PLTPP55058 493 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 VCPP55072 806 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 RPL7AP62424 266 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 OGDHQ02218 1023 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 RASA2Q15283 850 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 TRADDQ15628 312 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 FSCN1Q16658 493 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 KIZQ2M2Z5 673 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 SV2CQ496J9 727 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ZNF394Q53GI3 561 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ODF2Q5BJF6 829 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 TNFAIP8L3Q5GJ75 292 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 FBXO47Q5MNV8 452 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 C9orf57Q5W0N0 161 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 HFE2Q6ZVN8 426 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ZNF365Q70YC5 407 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ADAT2Q7Z6V5 191 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 PCGF5Q86SE9 256 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 TMEM110Q86TL2 294 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 RSPH3Q86UC2 560 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CDR2LQ86X02 465 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CPNE8Q86YQ8 564 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CCDC50Q8IVM0 306 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CNPY4Q8N129 248 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 RIBC1Q8N443 379 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 TOP6BLQ8N6T0 577 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CMASQ8NFW8 434 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 NUDT8Q8WV74 236 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 UBLCP1Q8WVY7 318 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 RIN2Q8WYP3 895 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 EDEM1Q92611 657 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ELMO3Q96BJ8 720 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ARL8AQ96BM9 186 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 TLCD1Q96CP7 247 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 ZBTB10Q96DT7 871 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 TWNKQ96RR1 684 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CPXM1Q96SM3 734 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 MTG1Q9BT17 334 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CAPS2Q9BXY5 557 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 TRIM6Q9C030 488 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 EPB41L4BQ9H329 900 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 SYNCQ9H7C4 482 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 PCDH9Q9HC56 1237 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 PRDM10Q9NQV6 1147 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CHST7Q9NS84 486 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 SLC38A7Q9NVC3 462 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 FLRT1Q9NZU1 646 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 HESX1Q9UBX0 185 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 CHORDC1Q9UHD1 332 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 SHOC2Q9UQ13 582 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 SNX24Q9Y343 169 aa7.02□□□□□ -1.29
CTNNA1-228ENST00000521640 A6NHS1 94 aa7.01□□□□□ -1.29
CTNNA1-228ENST00000521640 C3orf70A6NLC5 250 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-228ENST00000521640 C2CD4BA6NLJ0 364 aa7.01□□□□□ -1.29
CTNNA1-228ENST00000521640 FAM155AB1AL88 458 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms