RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 HOXA6P31267 233 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 CTHP32929 405 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 ACOT2P49753 483 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 CDR2Q01850 454 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 ROR1Q01973 937 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 UAP1L1Q3KQV9 507 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 ZNF568Q3ZCX4 644 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 TDRD10Q5VZ19 366 aaKnown RBP11.48□□□□□ -0.57
MRPS28-208ENST00000521605 MFSD6LQ8IWD5 586 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 RHOT2Q8IXI1 618 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 SYCE1Q8N0S2 351 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 PPM1KQ8N3J5 372 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 TTC39CQ8N584 583 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 DEFB124Q8NES8 71 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 EPS8L1Q8TE68 723 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 RFFLQ8WZ73 363 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 RSPRY1Q96DX4 576 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 ZFYVE19Q96K21 471 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 ZBTB45Q96K62 511 aaPredicted RBP11.48□□□□□ -0.57
MRPS28-208ENST00000521605 TCHPQ9BT92 498 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 IMPG2Q9BZV3 1241 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 CDT1Q9H211 546 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 C8orf33Q9H7E9 229 aaPredicted RBP11.48□□□□□ -0.57
MRPS28-208ENST00000521605 PLEKHA5Q9HAU0 1116 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 POLR3BQ9NW08 1133 aaPredicted RBP11.48□□□□□ -0.57
MRPS28-208ENST00000521605 SNTG2Q9NY99 539 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 GTSE1Q9NYZ3 720 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 ANKFY1Q9P2R3 1169 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 TRIM10Q9UDY6 481 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 SNX12Q9UMY4 172 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 C2CD2Q9Y426 696 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 HYOU1Q9Y4L1 999 aa11.48□□□□□ -0.57
MRPS28-208ENST00000521605 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
MRPS28-208ENST00000521605 FLNBO75369 2602 aaKnown RBP11.48□□□□□ -0.57
MRPS28-208ENST00000521605 ARHGEF37A1IGU5 675 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 DCLK1O15075 740 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 RTN2O75298 545 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 MOSPD3O75425 235 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 SEC24AO95486 1093 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 VNN1O95497 513 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 THP07101 528 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 TNFAIP3P21580 790 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 ATICP31939 592 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 PDE6CP51160 858 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 YWHAEP62258 255 aaKnown RBP11.47□□□□□ -0.57
MRPS28-208ENST00000521605 ARID5AQ03989 594 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 CUL2Q13617 745 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 CCINQ13939 588 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 TEAD2Q15562 447 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 SGSM1Q2NKQ1 1148 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 PLK5Q496M5 336 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 C1orf228Q6PIY5 440 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 RTL10Q7L3V2 364 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 PDZD3Q86UT5 571 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 UBR7Q8N806 425 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 CTNNBL1Q8WYA6 563 aaPredicted RBP11.47□□□□□ -0.57
MRPS28-208ENST00000521605 UBXN4Q92575 508 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 GOLGA1Q92805 767 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 TRIM11Q96F44 468 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 DDX27Q96GQ7 796 aaKnown RBP11.47□□□□□ -0.57
MRPS28-208ENST00000521605 MSANTD3Q96H12 275 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 CARD6Q9BX69 1037 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 TMEM9BQ9NQ34 198 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 SLC8A2Q9UPR5 921 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 INSL5Q9Y5Q6 135 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 CAPN6Q9Y6Q1 641 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 DUSP10Q9Y6W6 482 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 SPAG17Q6Q759 2223 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 ADAMTS20P59510 1910 aa11.47□□□□□ -0.57
MRPS28-208ENST00000521605 ASH1LQ9NR48 2969 aaKnown RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 FREM2Q5SZK8 3169 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 MACROD2A1Z1Q3 448 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 MYBPHLA2RUH7 354 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 CTAGE15A4D2H0 777 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 CHADO15335 359 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 B3GAT3O94766 335 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 CTAGE8P0CG41 777 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 MYBL1P10243 752 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 CYP11B1P15538 503 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 CSRP1P21291 193 aaKnown RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ACO1P21399 889 aaKnown RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 GRM5P41594 1212 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 PIK3CAP42336 1068 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 MATR3P43243 847 aaKnown RBP eCLIP11.46□□□□□ -0.576e-6■■■■□ 21.9
MRPS28-208ENST00000521605 BRCC3P46736 316 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ZNF132P52740 706 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 MLLT6P55198 1093 aaPredicted RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 NCOA4Q13772 614 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ELF2Q15723 593 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ENOX2Q16206 610 aaKnown RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 GLRA4Q5JXX5 417 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ANKS3Q6ZW76 656 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 CTAGE6Q86UF2 777 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 RALGPS2Q86X27 583 aaPredicted RBP11.46□□□□□ -0.57
MRPS28-208ENST00000521605 CTAGE4Q8IX94 777 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 ELMOD1Q8N336 334 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.57
MRPS28-208ENST00000521605 LRRC57Q8N9N7 239 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms