RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 SLC6A17Q9H1V8 727 aa14.35□□□□□ -0.11
SPARC-203ENST00000521327 SMYD3Q9H7B4 428 aa14.35□□□□□ -0.11
SPARC-203ENST00000521327 CD248Q9HCU0 757 aa14.35□□□□□ -0.11
SPARC-203ENST00000521327 DMAP1Q9NPF5 467 aaPredicted RBP14.35□□□□□ -0.11
SPARC-203ENST00000521327 CD93Q9NPY3 652 aa14.35□□□□□ -0.11
SPARC-203ENST00000521327 PCDHB9Q9Y5E1 797 aa14.35□□□□□ -0.11
SPARC-203ENST00000521327 RAD54BQ9Y620 910 aa14.35□□□□□ -0.11
SPARC-203ENST00000521327 ATP8B3O60423 1300 aa14.35□□□□□ -0.11
SPARC-203ENST00000521327 PCNX2A6NKB5 2137 aa14.35□□□□□ -0.11
SPARC-203ENST00000521327 LAMA5O15230 3695 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 MYO16Q9Y6X6 1858 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 PRRT4C9JH25 899 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 NEDD8-MDP1E9PL57 170 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 EIF3DO15371 548 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPARC-203ENST00000521327 TLR5O60602 858 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 NDUFS2O75306 463 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 AP1G2O75843 785 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 STAU1O95793 577 aaKnown RBP14.34□□□□□ -0.11
SPARC-203ENST00000521327 CAPNS1P04632 268 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 TYRP14679 529 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 MAOBP27338 520 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 ATICP31939 592 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 ASIC1P78348 528 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 SCAPQ12770 1279 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 SLC14A1Q13336 389 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 SYCP2LQ5T4T6 812 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 C19orf48Q6RUI8 117 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 TOGARAM2Q6ZUX3 1019 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 HTR3DQ70Z44 454 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 EPM2AIP1Q7L775 607 aaPredicted RBP14.34□□□□□ -0.11
SPARC-203ENST00000521327 NELFCDQ8IXH7 590 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 SPRYD3Q8NCJ5 442 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 ELMO3Q96BJ8 720 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 SMARCD1Q96GM5 515 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
SPARC-203ENST00000521327 USP28Q96RU2 1077 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 BBS2Q9BXC9 721 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 TRIM9Q9C026 710 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 LRRC27Q9C0I9 530 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 GZF1Q9H116 711 aaPredicted RBP14.34□□□□□ -0.11
SPARC-203ENST00000521327 TNMDQ9H2S6 317 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 FAM124BQ9H5Z6 455 aaPredicted RBP14.34□□□□□ -0.11
SPARC-203ENST00000521327 COMMD8Q9NX08 183 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 CACNA2D2Q9NY47 1150 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 WDR35Q9P2L0 1181 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 ANAPC1Q9H1A4 1944 aa14.34□□□□□ -0.11
SPARC-203ENST00000521327 NBEAQ8NFP9 2946 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 FAM92AA1XBS5 289 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 WASH3PC4AMC7 463 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 GREM1O60565 184 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 GJB3O75712 270 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 BEST1O76090 585 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 GNSP15586 552 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 SYT1P21579 422 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 CASP4P49662 377 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 BIRC3Q13489 604 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 FAM26FQ5R3K3 315 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 KIAA1324Q6UXG2 1013 aaKnown RBP14.33□□□□□ -0.12
SPARC-203ENST00000521327 ACOT1Q86TX2 421 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 FUKQ8N0W3 1084 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 TNIP3Q96KP6 325 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 MRGPRX1Q96LB2 322 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 SMOQ99835 787 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 GABRG3Q99928 467 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 KLF16Q9BXK1 252 aaPredicted RBP14.33□□□□□ -0.12
SPARC-203ENST00000521327 KRT82Q9NSB4 513 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 KBTBD4Q9NVX7 518 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 SUSD2Q9UGT4 822 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 KIAA1549LQ6ZVL6 1849 aa14.33□□□□□ -0.12
SPARC-203ENST00000521327 CACNG3O60359 315 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 FTH1P19P0C7X4 201 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 CCDC130P13994 396 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 AMPD3Q01432 767 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 ORC1Q13415 861 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 CUL4AQ13619 759 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 E2F4Q16254 413 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 ZNF699Q32M78 642 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 ZNF667Q5HYK9 610 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 WDR45BQ5MNZ6 344 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 SCARA5Q6ZMJ2 495 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 NAXDQ8IW45 347 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 ZMIZ2Q8NF64 920 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 ADAMTS14Q8WXS8 1223 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 FOXJ1Q92949 421 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 BHMTQ93088 406 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 SDCBP2Q9H190 292 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 FBXO44Q9H4M3 255 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 UPF2Q9HAU5 1272 aaKnown RBP14.32□□□□□ -0.12
SPARC-203ENST00000521327 TLR8Q9NR97 1041 aaKnown RBP14.32□□□□□ -0.12
SPARC-203ENST00000521327 GPSM3Q9Y4H4 160 aa14.32□□□□□ -0.12
SPARC-203ENST00000521327 ITPR1Q14643 2758 aa14.31□□□□□ -0.12
SPARC-203ENST00000521327 EXOC3O60645 756 aa14.31□□□□□ -0.12
SPARC-203ENST00000521327 CISD3P0C7P0 127 aa14.31□□□□□ -0.12
SPARC-203ENST00000521327 CD6P30203 668 aa14.31□□□□□ -0.12
SPARC-203ENST00000521327 ATP5C1P36542 298 aaKnown RBP14.31□□□□□ -0.12
SPARC-203ENST00000521327 DGKGP49619 791 aa14.31□□□□□ -0.12
SPARC-203ENST00000521327 MAP3K7CLP57077 242 aa14.31□□□□□ -0.12
SPARC-203ENST00000521327 SNRPFP62306 86 aaKnown RBP14.31□□□□□ -0.12
SPARC-203ENST00000521327 GRIK2Q13002 908 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms