RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 AP5M1Q9H0R1 490 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 ACSS3Q9H6R3 686 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 USP15Q9Y4E8 981 aaPredicted RBP26.79■■□□□ 1.88
COL13A1-213ENST00000520267 C17orf102A2RUQ5 167 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 DCAF8L1A6NGE4 600 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 XPOTO43592 962 aaKnown RBP26.78■■□□□ 1.88
COL13A1-213ENST00000520267 ASMTLO95671 621 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 TAC1P20366 129 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 PNPLA4P41247 253 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 LIMS2Q7Z4I7 341 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 DHRS4Q9BTZ2 278 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 RRAGCQ9HB90 399 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 SENP1Q9P0U3 644 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 FETUBQ9UGM5 382 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 TKTP29401 623 aaKnown RBP26.78■■□□□ 1.88
COL13A1-213ENST00000520267 L1CAMP32004 1257 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 ELK3P41970 407 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 IL9RQ01113 521 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 OSTM1Q86WC4 334 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 VSIG1Q86XK7 387 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 RTP4Q96DX8 246 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 PAFAH2Q99487 392 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 NCAPGQ9BPX3 1015 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 RAB6BQ9NRW1 208 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 PAK5Q9P286 719 aa26.78■■□□□ 1.88
COL13A1-213ENST00000520267 CYP2F1P24903 491 aa26.77■■□□□ 1.88
COL13A1-213ENST00000520267 SV2CQ496J9 727 aa26.77■■□□□ 1.88
COL13A1-213ENST00000520267 CGB2Q6NT52 195 aa26.77■■□□□ 1.88
COL13A1-213ENST00000520267 ADGRD1Q6QNK2 874 aa26.77■■□□□ 1.88
COL13A1-213ENST00000520267 TRPM8Q7Z2W7 1104 aa26.77■■□□□ 1.88
COL13A1-213ENST00000520267 ADGRF2Q8IZF7 708 aa26.77■■□□□ 1.88
COL13A1-213ENST00000520267 DHX35Q9H5Z1 703 aaKnown RBP26.77■■□□□ 1.88
COL13A1-213ENST00000520267 NRDE2Q9H7Z3 1164 aa26.77■■□□□ 1.88
COL13A1-213ENST00000520267 RPA3P35244 121 aaPredicted RBP26.77■■□□□ 1.88
COL13A1-213ENST00000520267 TAF1CQ15572 869 aaPredicted RBP26.77■■□□□ 1.88
COL13A1-213ENST00000520267 KLHL38Q2WGJ6 581 aa26.77■■□□□ 1.88
COL13A1-213ENST00000520267 ABCF3Q9NUQ8 709 aa26.77■■□□□ 1.88
COL13A1-213ENST00000520267 SMG5Q9UPR3 1016 aaKnown RBP26.77■■□□□ 1.88
COL13A1-213ENST00000520267 BCLAF3A2AJT9 711 aaKnown RBP26.76■■□□□ 1.87
COL13A1-213ENST00000520267 CHADO15335 359 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 SLC18A1P54219 525 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 DPYSL2Q16555 572 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 TYROBPO43914 113 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 HUS1O60921 280 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 AVILO75366 819 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 ZBED1O96006 694 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 SCNN1AP37088 669 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 LILRA4P59901 499 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 FAXCQ5TGI0 409 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 SPATA21Q7Z572 469 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 AGGF1Q8N302 714 aaeCLIP26.76■■□□□ 1.87
COL13A1-213ENST00000520267 TSPAN18Q96SJ8 248 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 MTMR10Q9NXD2 777 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 GRID1Q9ULK0 1009 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 TEX264Q9Y6I9 313 aa26.76■■□□□ 1.87
COL13A1-213ENST00000520267 CFAP69A5D8W1 941 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 TSHRP16473 764 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 ACADSBP45954 432 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 HUNKP57058 714 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 ARCQ7LC44 396 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 CCDC185Q8N715 623 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 DCAKDQ8WVC6 231 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 NDRG1Q92597 394 aaKnown RBP26.75■■□□□ 1.87
COL13A1-213ENST00000520267 HSFY1Q96LI6 401 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 CYLDQ9NQC7 956 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 GGT7Q9UJ14 662 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 AP4E1Q9UPM8 1137 aa26.75■■□□□ 1.87
COL13A1-213ENST00000520267 SUN1O94901 812 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 CA4P22748 312 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 SLC1A5Q15758 541 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 TWF2Q6IBS0 349 aaKnown RBP26.74■■□□□ 1.87
COL13A1-213ENST00000520267 FAM228AQ86W67 206 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 MZB1Q8WU39 189 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 KCTD15Q96SI1 283 aaPredicted RBP26.74■■□□□ 1.87
COL13A1-213ENST00000520267 ZNF487B1APH4 448 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 KBTBD13C9JR72 458 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 PTGESO14684 152 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 KRT4P19013 534 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 IGFBP6P24592 240 aaPredicted RBP26.74■■□□□ 1.87
COL13A1-213ENST00000520267 GBE1Q04446 702 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 SLC10A2Q12908 348 aaPredicted RBP26.74■■□□□ 1.87
COL13A1-213ENST00000520267 SPARCL1Q14515 664 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 B3GALNT2Q8NCR0 500 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 KATNAL1Q9BW62 490 aa26.74■■□□□ 1.87
COL13A1-213ENST00000520267 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.74■■□□□ 1.87
COL13A1-213ENST00000520267 WARSP23381 471 aaKnown RBP26.73■■□□□ 1.87
COL13A1-213ENST00000520267 MSH2P43246 934 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 PURAQ00577 322 aaKnown RBP26.73■■□□□ 1.87
COL13A1-213ENST00000520267 FSCN1Q16658 493 aaKnown RBP26.73■■□□□ 1.87
COL13A1-213ENST00000520267 NME8Q8N427 588 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 CCDC110Q8TBZ0 833 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 TNIP3Q96KP6 325 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 ZFP42Q96MM3 310 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 ETNK2Q9NVF9 386 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 PRKAG3Q9UGI9 489 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 Q9Y3F1 56 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 CLDN5O00501 218 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 ATP2A2P16615 1042 aaKnown RBP26.73■■□□□ 1.87
COL13A1-213ENST00000520267 HOXC8P31273 242 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 MTFR1Q15390 333 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms