RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 LIFRP42702 1097 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 DGKQP52824 942 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 FAM189BP81408 668 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 ITIH3Q06033 890 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 RESTQ13127 1097 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 MAPK7Q13164 816 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 ANKRD1Q15327 319 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 SLC9A4Q6AI14 798 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 NME8Q8N427 588 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 CEP70Q8NHQ1 597 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 SOCS4Q8WXH5 440 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 WWC2-AS2Q96NR7 200 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 HAPLN3Q96S86 360 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 ADOQ96SZ5 270 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 LIN7CQ9NUP9 197 aaKnown RBP6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 ADAMTS20P59510 1910 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 SAC3D1A6NKF1 404 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 EXOC5O00471 708 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 PPM1DO15297 605 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 SLC16A3O15427 465 aaKnown RBP6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 CTIFO43310 598 aaKnown RBP6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 TSPAN3O60637 253 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 BAIAP3O94812 1187 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 CD4P01730 458 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 LMNAP02545 664 aaKnown RBP6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 PPP3CBP16298 524 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 RXRAP19793 462 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 GSTM5P46439 218 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 SELENOPP49908 381 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 NXPH1P58417 271 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 SF3A3Q12874 501 aaKnown RBP eCLIP6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 MTAPQ13126 283 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 ICAM4Q14773 271 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 GALNTL6Q49A17 601 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 TMEM196Q5HYL7 178 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 FAM90A2PQ658T7 463 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 PIK3AP1Q6ZUJ8 805 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 B3GALNT2Q8NCR0 500 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 HMGB4Q8WW32 186 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 HDAC2Q92769 488 aaKnown RBP6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 ZNF768Q9H5H4 540 aaKnown RBP6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 ZCCHC4Q9H5U6 513 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 GLOD4Q9HC38 313 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 KCNK9Q9NPC2 374 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 DKK2Q9UBU2 259 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 SH2B3Q9UQQ2 575 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 ZBTB1Q9Y2K1 713 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 MAP3K2Q9Y2U5 619 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 UBE2J1Q9Y385 318 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 RRP7AQ9Y3A4 280 aaKnown RBP6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 TCAF1Q9Y4C2 921 aa6.02□□□□□ -1.45
HMGB1P46-201ENST00000520062 B4E171 279 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 KIF28PB7ZC32 967 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 PSMD9O00233 223 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 PROM1O43490 865 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 TMEM225BP0DP42 221 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 TSPAN7P41732 249 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 TXKP42681 527 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 EIF4A1P60842 406 aaKnown RBP6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 KCNJ12Q14500 433 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 DLGAP5Q15398 846 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 LY6KQ17RY6 165 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 CTXN3Q4LDR2 81 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 FAM180BQ6P0A1 224 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 DSTYKQ6XUX3 929 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 RASGRP2Q7LDG7 609 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 HEATR4Q86WZ0 1026 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 METTL25Q8N6Q8 603 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 C11orf44Q8N8P7 122 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 CPEB3Q8NE35 698 aaKnown RBP6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 SUPT20HQ8NEM7 779 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 GLG1Q92896 1179 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 MYEOVQ96EZ4 313 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 ADAM2Q99965 735 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 ABHD16BQ9H3Z7 469 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 ZNF703Q9H7S9 590 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 CHODLQ9H9P2 273 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 PARD6AQ9NPB6 346 aa6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 FBXO2Q9UK22 296 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P46-201ENST00000520062 A1L4Q6 167 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 FAM90A20PA6NIJ5 464 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 TMEM200CA6NKL6 621 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 SLC38A8A6NNN8 435 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 KRT38O76015 456 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 ONECUT2O95948 504 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 CAPN3P20807 821 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 PBX1P40424 430 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 MAGEA10P43363 369 aaPredicted RBP6□□□□□ -1.45
HMGB1P46-201ENST00000520062 TUBP50607 506 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 RBM5P52756 815 aaKnown RBP eCLIP6□□□□□ -1.45
HMGB1P46-201ENST00000520062 SP2Q02086 613 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 KHDRBS1Q07666 443 aaKnown RBP eCLIP6□□□□□ -1.45
HMGB1P46-201ENST00000520062 NFIXQ14938 502 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 PRKD1Q15139 912 aaPredicted RBP6□□□□□ -1.45
HMGB1P46-201ENST00000520062 P3H1Q32P28 736 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 AASDHQ4L235 1098 aaPredicted RBP6□□□□□ -1.45
HMGB1P46-201ENST00000520062 ZNF569Q5MCW4 686 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 ZNF618Q5T7W0 954 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 CCDC144NLQ6NUI1 221 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms