RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 GRAP2O75791 330 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 URODP06132 367 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 KRT10P13645 584 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 LCP1P13796 627 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 PDGFRAP16234 1089 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 GPD1P21695 349 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 CYP2F1P24903 491 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 MIPP30301 263 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 PTPN7P35236 360 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 COPS2P61201 443 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 SNX1Q13596 522 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 SH3PXD2AQ5TCZ1 1133 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 PIGZQ86VD9 579 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 MREGQ8N565 214 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 FBXO22Q8NEZ5 403 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 PIK3R5Q8WYR1 880 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 C17orf80Q9BSJ5 609 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 CNPY3Q9BT09 278 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 ZWILCHQ9H900 591 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 ASNSD1Q9NWL6 643 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 MTRRQ9UBK8 725 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 RASAL2Q9UJF2 1139 aa15.14■□□□□ 0.01
CLN8-204ENST00000519254 ADAM12O43184 909 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 ARHGEF15O94989 841 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 CA3P07451 260 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 KRT7P08729 469 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 OR1D2P34982 312 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 BMPR1AP36894 532 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 CETN2P41208 172 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 CDKN2BP42772 138 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 SNX16P57768 344 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 DSG1Q02413 1049 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 NFE2Q16621 373 aaPredicted RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 HADHQ16836 314 aaKnown RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 RAB6CQ53S08 254 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 ZFYVE27Q5T4F4 411 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 RAB6CQ9H0N0 254 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 CYLDQ9NQC7 956 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 ZDHHC18Q9NUE0 388 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 SNX24Q9Y343 169 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 PCDHB5Q9Y5E4 795 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 NLRC5Q86WI3 1866 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 hCG_1818297A0A087WSY0 165 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 LRRD1A4D1F6 860 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 AGPSO00116 658 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 DPYSL4O14531 572 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 TBC1D4O60343 1298 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 RNF8O76064 485 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 TRUB2O95900 331 aaKnown RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 OAS2P29728 719 aaKnown RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 PCK1P35558 622 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 HSPA9P38646 679 aaKnown RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 GRIK1P39086 918 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 RPL21P46778 160 aaKnown RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 ADIGQ0VDE8 80 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 CCNG2Q16589 344 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 C15orf59Q2T9L4 293 aaPredicted RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 SMTNL2Q2TAL5 461 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 CCDC14Q49A88 953 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 TFDP3Q5H9I0 405 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 RNF19BQ6ZMZ0 732 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 CYP4V2Q6ZWL3 525 aaPredicted RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 ZDHHC17Q8IUH5 632 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 SCN4BQ8IWT1 228 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 TTC9BQ8N6N2 239 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 ATAD1Q8NBU5 361 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 ZMIZ2Q8NF64 920 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 CLEC4CQ8WTT0 213 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 PEBP4Q96S96 227 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 ACBD3Q9H3P7 528 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 ALG13Q9NP73 1137 aaKnown RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 DMAP1Q9NPF5 467 aaPredicted RBP15.13■□□□□ 0.01
CLN8-204ENST00000519254 HOMER3Q9NSC5 361 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 GRHL1Q9NZI5 618 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 PCSK1NQ9UHG2 260 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 GBF1Q92538 1859 aa15.13■□□□□ 0.01
CLN8-204ENST00000519254 PLXNA4Q9HCM2 1894 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 ECEL1O95672 775 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 PBX2P40425 430 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 ROR1Q01973 937 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 TAZQ16635 292 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 KCNT1Q5JUK3 1230 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 KAZNQ674X7 775 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 ZDHHC24Q6UX98 284 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 GPRIN1Q7Z2K8 1008 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 CMASQ8NFW8 434 aaPredicted RBP15.12■□□□□ 0.01
CLN8-204ENST00000519254 HSFY1Q96LI6 401 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 CFAP57Q96MR6 1250 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 GDF15Q99988 308 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 FAM118BQ9BPY3 351 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 CLSTN3Q9BQT9 956 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 OXCT2Q9BYC2 517 aaPredicted RBP15.12■□□□□ 0.01
CLN8-204ENST00000519254 LRRC4Q9HBW1 653 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 MRPL17Q9NRX2 175 aaKnown RBP15.12■□□□□ 0.01
CLN8-204ENST00000519254 USP18Q9UMW8 372 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 SLC27A5Q9Y2P5 690 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 BACE2Q9Y5Z0 518 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 PTPRDP23468 1912 aa15.12■□□□□ 0.01
CLN8-204ENST00000519254 WDR27A2RRH5 827 aa15.11■□□□□ 0.01
CLN8-204ENST00000519254 MTMR11A4FU01 709 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms