RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 RP9Q8TA86 221 aaKnown RBP-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 TBC1D15Q8TC07 691 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 KLHL6Q8WZ60 621 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 INPP5DQ92835 1189 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 TRMT61AQ96FX7 289 aaKnown RBP-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF799Q96GE5 643 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 URB1-AS1Q96HZ7 61 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 AGAP3Q96P47 875 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 WDR83Q9BRX9 315 aaKnown RBP-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 SYT11Q9BT88 431 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 PITHD1Q9GZP4 211 aaPredicted RBP-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 SLC25A18Q9H1K4 315 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 NTN4Q9HB63 628 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 PDFQ9HBH1 243 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 CAPN10Q9HC96 672 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 PODXL2Q9NZ53 605 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 CTTNBP2NLQ9P2B4 639 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF229Q9UJW7 825 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 MAFFQ9ULX9 164 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 MOB4Q9Y3A3 225 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 LOXL2Q9Y4K0 774 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 SLC12A7Q9Y666 1083 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 PTCH1Q13635 1447 aa-0.75□□□□□ -2.53
SNORA40.16-201ENST00000517238 TDRD15B5MCY1 1934 aaKnown RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 CCDC195A0A1B0GUA6 201 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 GSG1L2A8MUP6 293 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 HHLA1C9JL84 531 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 J3QKU1 62 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF561-AS1K7EIQ3 104 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 SH2B2O14492 632 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TCERG1O14776 1098 aaKnown RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 HAT1O14929 419 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 INPPL1O15357 1258 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 HDAC3O15379 428 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TREHO43280 583 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 FGAP02671 866 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF133P52736 654 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 APOBRQ0VD83 1088 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 NEDD9Q14511 834 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 SEPT7Q16181 437 aaKnown RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 CRY1Q16526 586 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 C4orf46Q504U0 113 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TDRD12Q587J7 1177 aaKnown RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TTC38Q5R3I4 469 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 FNBP1LQ5T0N5 605 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 FBXW10Q5XX13 1052 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 HIBCHQ6NVY1 386 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TMEM65Q6PI78 240 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 DOK6Q6PKX4 331 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 KCNT2Q6UVM3 1135 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 IGFL2Q6UWQ7 119 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 RANBP10Q6VN20 620 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TFAP2EQ6VUC0 442 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 UBE3BQ7Z3V4 1068 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 BCDIN3DQ7Z5W3 292 aaKnown RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TBC1D1Q86TI0 1168 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 MCF2L2Q86YR7 1114 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 ARL14EPQ8N8R7 260 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 KBTBD3Q8NAB2 608 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 NSUN7Q8NE18 718 aaKnown RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 OR1N1Q8NGS0 311 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 FAM216AQ8WUB2 273 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TMEM174Q8WUU8 243 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 MAML1Q92585 1016 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 FRMD6Q96NE9 622 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TUBGCP5Q96RT8 1024 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 RPP25Q9BUL9 199 aaKnown RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TLR10Q9BXR5 811 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 SLITRK2Q9H156 845 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 ISCUQ9H1K1 167 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 MRPL46Q9H2W6 279 aaKnown RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 CLK4Q9HAZ1 481 aaKnown RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 KRCC1Q9NPI7 259 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 ASIC5Q9NY37 505 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 UBP1Q9NZI7 540 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 LRP2BPQ9P2M1 347 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 CTSZQ9UBR2 303 aa-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF223Q9UK11 482 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 ASTN2O75129 1339 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40.16-201ENST00000517238 TRBV5-3A0A0A0MS03 114 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 MAGEA13PA6NCF6 341 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 CCP110O43303 1012 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 ADCY6O43306 1168 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 AKAP10O43572 662 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 DFNA5O60443 496 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 GREM1O60565 184 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 KCNJ13O60928 360 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 EFCAB14O75071 495 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 KIF20AO95235 890 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 GASTP01350 101 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 FESP07332 822 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 PYGMP11217 842 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 CHRNB1P11230 501 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 MARK3P27448 753 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 TACR3P29371 465 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 KIR3DL2P43630 455 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 ST13P50502 369 aaKnown RBP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 CRISP1P54107 249 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 TPTEP56180 551 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 GPR85P60893 370 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms