RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PMS2P54278 862 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 NUCB1Q02818 461 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 TWF1Q12792 350 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 NFATC2Q13469 925 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 KCNAB1Q14722 419 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 SLC10A6Q3KNW5 377 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 ARHGAP15Q53QZ3 475 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 PLEKHA7Q6IQ23 1121 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 TTBK2Q6IQ55 1244 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 ZSCAN25Q6NSZ9 544 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 C11orf87Q6NUJ2 197 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 BTNL9Q6UXG8 535 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 PAMR1Q6UXH9 720 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 LINGO4Q6UY18 593 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 SPOCD1Q6ZMY3 1216 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 TRMT11Q7Z4G4 463 aaKnown RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 B3GNT8Q7Z7M8 397 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 AACSQ86V21 672 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 CHD1LQ86WJ1 897 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 CACNA2D3Q8IZS8 1091 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 SLC25A45Q8N413 288 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 RBMXL3Q8N7X1 1067 aaKnown RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 IL31RAQ8NI17 732 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 SKA1Q96BD8 255 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 DBNDD2Q9BQY9 259 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 SLC25A23Q9BV35 468 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 RNF32Q9H0A6 362 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 TNMDQ9H2S6 317 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 SMARCAD1Q9H4L7 1026 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 SYNDIG1Q9H7V2 258 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 KAT14Q9H8E8 782 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 GPN2Q9H9Y4 310 aaPredicted RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 RSAD1Q9HA92 442 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 MRPL40Q9NQ50 206 aaKnown RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 CRTAC1Q9NQ79 661 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 CYLDQ9NQC7 956 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 ITM2CQ9NQX7 267 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 FGF21Q9NSA1 209 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 FAM105AQ9NUU6 356 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 LOXL2Q9Y4K0 774 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 TIMM13Q9Y5L4 95 aaPredicted RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 U3KQA8 63 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 A0A0B4J269 797 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 GRID2IPA4D2P6 1211 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 A6NCN8 305 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 SPATA31C2B4DYI2 1134 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 CCL21O00585 134 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 IGHDP01880 384 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 APODP05090 189 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 PRKCBP05771 671 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 MX1P20591 662 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 AGAP20933 346 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 CD27P26842 260 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 UGT1A3P35503 534 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 NT5C2P49902 561 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 TPMTP51580 245 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 RACK1P63244 317 aaKnown RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 CYP4F8P98187 520 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 MC1RQ01726 317 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 CYP4A11Q02928 519 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 NR1H3Q13133 447 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 KEAP1Q14145 624 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 ZNF235Q14590 738 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 SART3Q15020 963 aaKnown RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 UBE3CQ15386 1083 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 PLEKHN1Q494U1 663 aaPredicted RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 ARSHQ5FYA8 562 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 ANKRD45Q5TZF3 282 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 LIPNQ5VXI9 398 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 TWF2Q6IBS0 349 aaKnown RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 Q6ZPA2 131 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 CENPQQ7L2Z9 268 aaPredicted RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 EFL1Q7Z2Z2 1120 aaKnown RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 METTL3Q86U44 580 aaKnown RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 FAM124AQ86V42 546 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 KCNMB4Q86W47 210 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 TCEAL8Q8IYN2 117 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 DEPDC4Q8N2C3 294 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 VWA5B2Q8N398 1253 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 TPCN2Q8NHX9 752 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 ZNF461Q8TAF7 563 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 HASPINQ8TF76 798 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 STARD8Q92502 1023 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 TNPO1Q92973 898 aaKnown RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 BIRC7Q96CA5 298 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 PGBD4Q96DM1 585 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 CCDC138Q96M89 665 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 SLC6A18Q96N87 628 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 GPATCH1Q9BRR8 931 aaKnown RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 NUP58Q9BVL2 599 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 TRIM55Q9BYV6 548 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 STRADBQ9C0K7 418 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 PCED1AQ9H1Q7 454 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 IL1RAPL2Q9NP60 686 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 YAE1D1Q9NRH1 226 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 AGPAT4Q9NRZ5 378 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 DUS2Q9NX74 493 aaKnown RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 LRFN1Q9P244 771 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms