RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 ANKRD1Q15327 319 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 SF3A1Q15459 793 aaKnown RBP12.56□□□□□ -0.4
CSF1R-208ENST00000515239 FUT11Q495W5 492 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 DTHD1Q6ZMT9 781 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 CSGALNACT2Q8N6G5 542 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 LRRC52Q8N7C0 313 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 FAM181AQ8N9Y4 354 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 KBTBD7Q8WVZ9 684 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 FGF11Q92914 225 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 WBP1Q96G27 269 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 PCED1BQ96HM7 432 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 C8orf48Q96LL4 319 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 SYT15Q9BQS2 421 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 SEMA4CQ9C0C4 833 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 IKZF4Q9H2S9 585 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 TMEM30AQ9NV96 361 aa12.56□□□□□ -0.4
CSF1R-208ENST00000515239 DNAJC17Q9NVM6 304 aaKnown RBP12.56□□□□□ -0.4
CSF1R-208ENST00000515239 CACNG3O60359 315 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 GREM1O60565 184 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 IGLV3-19P01714 112 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 CISD3P0C7P0 127 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 ANXA13P27216 316 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 PRPHP41219 470 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 AFF3P51826 1226 aaKnown RBP12.55□□□□□ -0.4
CSF1R-208ENST00000515239 CXADRP78310 365 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 ST3GAL1Q11201 340 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 TARDBPQ13148 414 aaKnown RBP eCLIP12.55□□□□□ -0.4
CSF1R-208ENST00000515239 TAF1BQ53T94 588 aaPredicted RBP12.55□□□□□ -0.4
CSF1R-208ENST00000515239 TDRD10Q5VZ19 366 aaKnown RBP12.55□□□□□ -0.4
CSF1R-208ENST00000515239 CENPQQ7L2Z9 268 aaPredicted RBP12.55□□□□□ -0.4
CSF1R-208ENST00000515239 DPH6Q7L8W6 267 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 FMNL3Q8IVF7 1028 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 ZSWIM2Q8NEG5 633 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 SCFD1Q8WVM8 642 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 BAP1Q92560 729 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 SLITRK1Q96PX8 696 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 NRSN2Q9GZP1 204 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 PARVGQ9HBI0 331 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 CHORDC1Q9UHD1 332 aaPredicted RBP12.55□□□□□ -0.4
CSF1R-208ENST00000515239 CDH9Q9ULB4 789 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 PCDHGA1Q9Y5H4 931 aa12.55□□□□□ -0.4
CSF1R-208ENST00000515239 LAD1O00515 517 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 WISP1O95388 367 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 PDGFRBP09619 1106 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 TYRP14679 529 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 OXTRP30559 389 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 HNF1BP35680 557 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 CACNA2D1P54289 1103 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 CYP27A1Q02318 531 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 MAPRE1Q15691 268 aaKnown RBP12.54□□□□□ -0.4
CSF1R-208ENST00000515239 KCNT1Q5JUK3 1230 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 TMPRSS6Q8IU80 811 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 SPACA3Q8IXA5 215 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 FBXO18Q8NFZ0 1043 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 MYCBPAPQ8TBZ2 947 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 CACTINQ8WUQ7 758 aaKnown RBP12.54□□□□□ -0.4
CSF1R-208ENST00000515239 IGSF8Q969P0 613 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 NUP58Q9BVL2 599 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 TRIM9Q9C026 710 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 FTSJ1Q9UET6 329 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 SIX4Q9UIU6 781 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 NOL7Q9UMY1 257 aaKnown RBP12.54□□□□□ -0.4
CSF1R-208ENST00000515239 STON1Q9Y6Q2 735 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 TMEM131Q92545 1883 aa12.54□□□□□ -0.4
CSF1R-208ENST00000515239 NEDD8-MDP1E9PL57 170 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 H0Y8X5 98 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 FAM13AO94988 1023 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 YWHAQP27348 245 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 RBP5P82980 135 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 CCDC173Q0VFZ6 552 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 ENPP2Q13822 863 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 GSE1Q14687 1217 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 TMEM119Q4V9L6 283 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 SNX30Q5VWJ9 437 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 USP49Q70CQ1 688 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 ENGASEQ8NFI3 743 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 POMGNT1Q8WZA1 660 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 TMEM176AQ96HP8 235 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 XPO6Q96QU8 1125 aaKnown RBP12.53□□□□□ -0.4
CSF1R-208ENST00000515239 BBS2Q9BXC9 721 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 CCSER2Q9H7U1 834 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 OSGEPQ9NPF4 335 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 WDR35Q9P2L0 1181 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 FBXO10Q9UK96 956 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 ITGA11Q9UKX5 1188 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 NME7Q9Y5B8 376 aa12.53□□□□□ -0.4
CSF1R-208ENST00000515239 PTPN13Q12923 2485 aa12.52□□□□□ -0.4
CSF1R-208ENST00000515239 UNC79Q9P2D8 2635 aa12.52□□□□□ -0.4
CSF1R-208ENST00000515239 PAPSS1O43252 624 aaPredicted RBP12.52□□□□□ -0.41
CSF1R-208ENST00000515239 KRT19P08727 400 aa12.52□□□□□ -0.41
CSF1R-208ENST00000515239 C1SP09871 688 aa12.52□□□□□ -0.41
CSF1R-208ENST00000515239 C6P13671 934 aa12.52□□□□□ -0.41
CSF1R-208ENST00000515239 ACO1P21399 889 aaKnown RBP12.52□□□□□ -0.41
CSF1R-208ENST00000515239 WARSP23381 471 aaKnown RBP12.52□□□□□ -0.41
CSF1R-208ENST00000515239 CTSKP43235 329 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms