RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 SHBQ15464 509 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 LINC00303Q3SY05 128 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 CFAP221Q4G0U5 840 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 CLEC18BQ6UXF7 455 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMAD5-210ENST00000515005 SPATA2LQ8IUW3 424 aaPredicted RBP12.61□□□□□ -0.39
SMAD5-210ENST00000515005 PDCL2Q8N4E4 241 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 CLEC18CQ8NCF0 446 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 TMEM161BQ8NDZ6 487 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 OTUB2Q96DC9 234 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 ACBD6Q9BR61 282 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 LARP6Q9BRS8 491 aaKnown RBP12.61□□□□□ -0.39
SMAD5-210ENST00000515005 TRIM9Q9C026 710 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 DDX43Q9NXZ2 648 aaKnown RBP12.61□□□□□ -0.39
SMAD5-210ENST00000515005 BSNQ9UPA5 3926 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 DXOO77932 396 aaKnown RBP12.6□□□□□ -0.39
SMAD5-210ENST00000515005 MT-CO3P00414 261 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 MAPTP10636 758 aaKnown RBP12.6□□□□□ -0.39
SMAD5-210ENST00000515005 ABCB4P21439 1286 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 ERVPABLB-1P60509 514 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 GABREP78334 506 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 TLE1Q04724 770 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 ORC1Q13415 861 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 ILKQ13418 452 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 ADAT2Q7Z6V5 191 aaKnown RBP12.6□□□□□ -0.39
SMAD5-210ENST00000515005 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
SMAD5-210ENST00000515005 ERMNQ8TAM6 284 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 SAP25Q8TEE9 199 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 PRCCQ92733 491 aaPredicted RBP12.6□□□□□ -0.39
SMAD5-210ENST00000515005 WBP2Q969T9 261 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 VCPIP1Q96JH7 1222 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 NTPCRQ9BSD7 190 aaKnown RBP12.6□□□□□ -0.39
SMAD5-210ENST00000515005 RUSC1Q9BVN2 902 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 PCED1AQ9H1Q7 454 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 DPP3Q9NY33 737 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 LRWD1Q9UFC0 647 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 KIAA1024Q9UPX6 916 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 CKAP5Q14008 2032 aa12.6□□□□□ -0.39
SMAD5-210ENST00000515005 NEDD8-MDP1E9PL57 170 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 OGTO15294 1046 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 CACNG3O60359 315 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 ACSL1P33121 698 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 MAGEA11P43364 429 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 STK3Q13188 491 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 KYAT1Q16773 422 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 DENND5BQ6ZUT9 1274 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 OSTM1Q86WC4 334 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 CD302Q8IX05 232 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 LSMEM2Q8N112 164 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 BIRC7Q96CA5 298 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 BICD1Q96G01 975 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 FUBP3Q96I24 572 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMAD5-210ENST00000515005 SPATA17Q96L03 361 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 ELF4Q99607 663 aaPredicted RBP12.59□□□□□ -0.39
SMAD5-210ENST00000515005 ORAI3Q9BRQ5 295 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 TTLL2Q9BWV7 592 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 ASCL3Q9NQ33 180 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 ADAMTS1Q9UHI8 967 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 L1RE1Q9UN81 338 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 PLXNA2O75051 1894 aa12.59□□□□□ -0.39
SMAD5-210ENST00000515005 CENPEQ02224 2701 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 BLACEA4D250 179 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 ATP2C2O75185 946 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 CISD3P0C7P0 127 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 ACADMP11310 421 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 TYRP14679 529 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 CKMT2P17540 419 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 XBP1P17861 261 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 CD27P26842 260 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 KRT2P35908 639 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 CCT6AP40227 531 aaKnown RBP12.58□□□□□ -0.4
SMAD5-210ENST00000515005 COPAP53621 1224 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 RIPPLY3P57055 190 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 C21orf59P57076 290 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 MYL7Q01449 175 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 TAF10Q12962 218 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 TOB2Q14106 344 aaPredicted RBP12.58□□□□□ -0.4
SMAD5-210ENST00000515005 SV2CQ496J9 727 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 CPLX2Q6PUV4 134 aaKnown RBP12.58□□□□□ -0.4
SMAD5-210ENST00000515005 CCDC81Q6ZN84 652 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 KCNB2Q92953 911 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 C17orf75Q9HAS0 396 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
SMAD5-210ENST00000515005 DERAQ9Y315 318 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 SH3BP1Q9Y3L3 701 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 SNX14Q9Y5W7 946 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 POLQO75417 2590 aa12.58□□□□□ -0.4
SMAD5-210ENST00000515005 VILLO15195 856 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 COCHO43405 550 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 TSPAN3O60637 253 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 FSBPO95073 299 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 MUTP22033 750 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 MCM7P33993 719 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 LSSP48449 732 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 PPP3CCP48454 512 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 RINT1Q6NUQ1 792 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 FAM171BQ6P995 826 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 C1orf186Q6ZWK4 172 aa12.57□□□□□ -0.4
SMAD5-210ENST00000515005 XPO6Q96QU8 1125 aaKnown RBP12.57□□□□□ -0.4
SMAD5-210ENST00000515005 BBS2Q9BXC9 721 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms