RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SECISBP2LQ93073 1101 aaKnown RBP25.76■■□□□ 1.71
SNF8-213ENST00000514929 ACDQ96AP0 544 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 CDK5RAP1Q96SZ6 601 aaKnown RBP25.76■■□□□ 1.71
SNF8-213ENST00000514929 PNKPQ96T60 521 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 CLSTN2Q9H4D0 955 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 XPO1O14980 1071 aaKnown RBP25.75■■□□□ 1.71
SNF8-213ENST00000514929 PAEPP09466 180 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 CNR2P34972 360 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 PLA2G4AP47712 749 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 SLC6A11P48066 632 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 TKTL1P51854 596 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 BST2Q10589 180 aaKnown RBP25.75■■□□□ 1.71
SNF8-213ENST00000514929 RAB41Q5JT25 222 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 BTBD8Q5XKL5 378 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 HTR3DQ70Z44 454 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 RRAGAQ7L523 313 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 WDR5BQ86VZ2 330 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 MLKLQ8NB16 471 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 KAT5Q92993 513 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 SPHK2Q9NRA0 654 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 ATG2BQ96BY7 2078 aa25.75■■□□□ 1.71
SNF8-213ENST00000514929 TULP2O00295 520 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 O00370 1275 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 PXNP49023 591 aaPredicted RBP25.74■■□□□ 1.71
SNF8-213ENST00000514929 SEC13P55735 322 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 SIM2Q14190 667 aaPredicted RBP25.74■■□□□ 1.71
SNF8-213ENST00000514929 ANO4Q32M45 955 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 SYT13Q7L8C5 426 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 C12orf40Q86WS4 652 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 MIB1Q86YT6 1006 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 ARHGEF19Q8IW93 802 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 ZNF276Q8N554 614 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 UBA3Q8TBC4 463 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 INTS2Q9H0H0 1204 aaKnown RBP25.74■■□□□ 1.71
SNF8-213ENST00000514929 LRRC4Q9HBW1 653 aa25.74■■□□□ 1.71
SNF8-213ENST00000514929 POLR3BQ9NW08 1133 aaPredicted RBP25.74■■□□□ 1.71
SNF8-213ENST00000514929 WDR87Q6ZQQ6 2873 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.73■■□□□ 1.71
SNF8-213ENST00000514929 K7EQS6 105 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 HRO43593 1189 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 ZBED1O96006 694 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 APODP05090 189 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 SETSIPP0DME0 302 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 YWHAGP61981 247 aaKnown RBP eCLIP25.73■■□□□ 1.71
SNF8-213ENST00000514929 GCNT1Q02742 428 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 SRSF5Q13243 272 aaKnown RBP25.73■■□□□ 1.71
SNF8-213ENST00000514929 LPAL2Q16609 132 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 C2orf27AQ580R0 203 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 TMEM25Q86YD3 366 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 KIAA2013Q8IYS2 634 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 CAMKK1Q8N5S9 505 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 NAT16Q8N8M0 369 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 CNOT6LQ96LI5 555 aaKnown RBP25.73■■□□□ 1.71
SNF8-213ENST00000514929 ULBP1Q9BZM6 244 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 ARHGEF4Q9NR80 690 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 RASAL2Q9UJF2 1139 aa25.73■■□□□ 1.71
SNF8-213ENST00000514929 HOXC11O43248 304 aaPredicted RBP25.72■■□□□ 1.71
SNF8-213ENST00000514929 KAT7O95251 611 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 KDSRQ06136 332 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 EFEMP1Q12805 493 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 DMC1Q14565 340 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 LCLAT1Q6UWP7 414 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 CEP68Q76N32 757 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 RSRC2Q7L4I2 434 aaKnown RBP25.72■■□□□ 1.71
SNF8-213ENST00000514929 RBBP8NLQ8NC74 664 aaPredicted RBP25.72■■□□□ 1.71
SNF8-213ENST00000514929 USP33Q8TEY7 942 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 TFAP2BQ92481 460 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 IPO9Q96P70 1041 aaKnown RBP25.72■■□□□ 1.71
SNF8-213ENST00000514929 HHIPQ96QV1 700 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 GMEB2Q9UKD1 530 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 EP300Q09472 2414 aaPredicted RBP25.72■■□□□ 1.71
SNF8-213ENST00000514929 GVINP1Q7Z2Y8 2422 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 FRYLO94915 3013 aa25.72■■□□□ 1.71
SNF8-213ENST00000514929 RNF225M0QZC1 329 aaPredicted RBP25.71■■□□□ 1.71
SNF8-213ENST00000514929 GREM1O60565 184 aa25.71■■□□□ 1.71
SNF8-213ENST00000514929 ADIGQ0VDE8 80 aa25.71■■□□□ 1.71
SNF8-213ENST00000514929 TPD52L1Q16890 204 aaPredicted RBP25.71■■□□□ 1.71
SNF8-213ENST00000514929 PM20D1Q6GTS8 502 aa25.71■■□□□ 1.71
SNF8-213ENST00000514929 SIX6OS1Q8N1H7 587 aa25.71■■□□□ 1.71
SNF8-213ENST00000514929 NUP62CLQ9H1M0 184 aa25.71■■□□□ 1.71
SNF8-213ENST00000514929 DEC1Q9P2X7 70 aa25.71■■□□□ 1.71
SNF8-213ENST00000514929 KIAA1549LQ6ZVL6 1849 aa25.71■■□□□ 1.71
SNF8-213ENST00000514929 OTOGLQ3ZCN5 2332 aa25.7■■□□□ 1.71
SNF8-213ENST00000514929 MYOFQ9NZM1 2061 aa25.7■■□□□ 1.71
SNF8-213ENST00000514929 CCDC163A0A0D9SF12 145 aa25.7■■□□□ 1.7
SNF8-213ENST00000514929 BRD2P25440 801 aaKnown RBP25.7■■□□□ 1.7
SNF8-213ENST00000514929 GRIA2P42262 883 aa25.7■■□□□ 1.7
SNF8-213ENST00000514929 COG7P83436 770 aa25.7■■□□□ 1.7
SNF8-213ENST00000514929 MESP2Q0VG99 397 aa25.7■■□□□ 1.7
SNF8-213ENST00000514929 STILQ15468 1287 aa25.7■■□□□ 1.7
SNF8-213ENST00000514929 PREPLQ4J6C6 727 aaPredicted RBP25.7■■□□□ 1.7
SNF8-213ENST00000514929 LAIR1Q6GTX8 287 aa25.7■■□□□ 1.7
SNF8-213ENST00000514929 MED15Q96RN5 788 aa25.7■■□□□ 1.7
SNF8-213ENST00000514929 STRIP2Q9ULQ0 834 aa25.7■■□□□ 1.7
SNF8-213ENST00000514929 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.7■■□□□ 1.7
SNF8-213ENST00000514929 ZNF292O60281 2723 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 M0QYV0 167 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 TULP3O75386 442 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 STC2O76061 302 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 APBB3O95704 486 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms