RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 LEO1Q8WVC0 666 aaPredicted RBP12.64□□□□□ -0.39
SFXN1-210ENST00000513725 HPS3Q969F9 1004 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
SFXN1-210ENST00000513725 SLC26A6Q9BXS9 759 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 RNF38Q9H0F5 515 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 GDF3Q9NR23 364 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 SPHK2Q9NRA0 654 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 ANAPC2Q9UJX6 822 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 PCDHA12Q9UN75 941 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 SATB2Q9UPW6 733 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 ABLIM1O14639 778 aa12.63□□□□□ -0.39
SFXN1-210ENST00000513725 TSPAN3O60637 253 aa12.63□□□□□ -0.39
SFXN1-210ENST00000513725 DUSP3P51452 185 aaPredicted RBP12.63□□□□□ -0.39
SFXN1-210ENST00000513725 PPP2R3AQ06190 1150 aa12.63□□□□□ -0.39
SFXN1-210ENST00000513725 TBR1Q16650 682 aa12.63□□□□□ -0.39
SFXN1-210ENST00000513725 KIFAP3Q92845 792 aa12.63□□□□□ -0.39
SFXN1-210ENST00000513725 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
SFXN1-210ENST00000513725 TMEM134Q9H6X4 195 aa12.63□□□□□ -0.39
SFXN1-210ENST00000513725 TTC26A0AVF1 554 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 ARHGEF35A5YM69 484 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 CCDC169A6NNP5 214 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 NPC1O15118 1278 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 CYP26A1O43174 497 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 OPA1O60313 960 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 SEMA4FO95754 770 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 OLFM2O95897 454 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 ACSL1P33121 698 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 PPP3CCP48454 512 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 OXCT1P55809 520 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 DAB2P98082 770 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 MYL7Q01449 175 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 PROX2Q3B8N5 592 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 SFMBT2Q5VUG0 894 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 WSCD1Q658N2 575 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 GALNT17Q6IS24 598 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 CACUL1Q86Y37 369 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 TMEM25Q86YD3 366 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 SCN4BQ8IWT1 228 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 SSC4DQ8WTU2 575 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 MOCOSQ96EN8 888 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 TSPAN18Q96SJ8 248 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 PYM1Q9BRP8 204 aaKnown RBP12.62□□□□□ -0.39
SFXN1-210ENST00000513725 ADNPQ9H2P0 1102 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 PLAAQ9Y263 795 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 SH3BP1Q9Y3L3 701 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 PCDHGA8Q9Y5G5 932 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 PCNX1Q96RV3 2341 aa12.62□□□□□ -0.39
SFXN1-210ENST00000513725 A0A1B0GTL3 188 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 CDRT15L2A8MXV6 281 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 ABL1P00519 1130 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 CLTAP09496 248 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 MBL2P11226 248 aaPredicted RBP12.61□□□□□ -0.39
SFXN1-210ENST00000513725 GRNP28799 593 aaKnown RBP12.61□□□□□ -0.39
SFXN1-210ENST00000513725 DCTP40126 519 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 EXOSC10Q01780 885 aaKnown RBP12.61□□□□□ -0.39
SFXN1-210ENST00000513725 BNIP3Q12983 259 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 FHL5Q5TD97 284 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 SPATA1Q5VX52 437 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 C9orf57Q5W0N0 161 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 CREB3L3Q68CJ9 461 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 OXR1Q8N573 874 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 GRAMD1AQ96CP6 724 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 ZBTB45Q96K62 511 aaPredicted RBP12.61□□□□□ -0.39
SFXN1-210ENST00000513725 BTBD1Q9H0C5 482 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 EHD2Q9NZN4 543 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 TJP2Q9UDY2 1190 aa12.61□□□□□ -0.39
SFXN1-210ENST00000513725 A1L4Q6 167 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 ZNF840PA6NDX5 716 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 NEDD8-MDP1E9PL57 170 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 PIRO00625 290 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 CACNG3O60359 315 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 TOM1L1O75674 476 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 MLLT3P42568 568 aaPredicted RBP12.6□□□□□ -0.39
SFXN1-210ENST00000513725 COPAP53621 1224 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 PDIA5Q14554 519 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 HS1BP3Q53T59 392 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 ZC3H18Q86VM9 953 aaKnown RBP12.6□□□□□ -0.39
SFXN1-210ENST00000513725 SPATA2LQ8IUW3 424 aaPredicted RBP12.6□□□□□ -0.39
SFXN1-210ENST00000513725 ZSCAN1Q8NBB4 408 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 SLC6A18Q96N87 628 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 ABCG4Q9H172 646 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 POLD4Q9HCU8 107 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 DNHD1Q96M86 4753 aa12.6□□□□□ -0.39
SFXN1-210ENST00000513725 ARID1BQ8NFD5 2236 aaPredicted RBP12.6□□□□□ -0.39
SFXN1-210ENST00000513725 NUMA1Q14980 2115 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 LACTBL1A8MY62 500 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 CLDN3O15551 220 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 MATR3P43243 847 aaKnown RBP eCLIP12.59□□□□□ -0.39
SFXN1-210ENST00000513725 RXRGP48443 463 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 DGKGP49619 791 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 TAF6P49848 677 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 PEX3P56589 373 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 MORC3Q14149 939 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 CLCA4Q14CN2 919 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 E2F5Q15329 346 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 ISXQ2M1V0 245 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 CFAP221Q4G0U5 840 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 CLEC14AQ86T13 490 aa12.59□□□□□ -0.39
SFXN1-210ENST00000513725 BBS7Q8IWZ6 715 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms