RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MYEOVQ96EZ4 313 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 COQ10AQ96MF6 247 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 DEPDC7Q96QD5 511 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 SRPK1Q96SB4 655 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 STRBPQ96SI9 672 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 C16orf70Q9BSU1 422 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 AARSD1Q9BTE6 412 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 ST7Q9NRC1 585 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 MAP3K20Q9NYL2 800 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 IGSF9Q9P2J2 1179 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 ASB1Q9Y576 335 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 DDX49Q9Y6V7 483 aaKnown RBP4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 PLIN4Q96Q06 1357 aa4.23□□□□□ -1.73
PDLIM5-218ENST00000513341 KAT6AQ92794 2004 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 WDR19Q8NEZ3 1342 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 FRYLO94915 3013 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 PRAMEF25A6NGN4 478 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 GSG1L2A8MUP6 293 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 C2CD4DB7Z1M9 353 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 PER2O15055 1255 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 TBC1D4O60343 1298 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 KINO60870 393 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 ONECUT2O95948 504 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 SP9P0CG40 484 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 TYRP1P17643 537 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 ATP5JP18859 108 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 APEX1P27695 318 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 TECP42680 631 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 NOVP48745 357 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 RARSP54136 660 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 TFAP4Q01664 338 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 DMWDQ09019 674 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 NONOQ15233 471 aaKnown RBP eCLIP4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 MTERF2Q49AM1 385 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 ZC3H12BQ5HYM0 836 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 TAF2Q6P1X5 1199 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 SEPT14Q6ZU15 432 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 NOP9Q86U38 636 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 RSPH3Q86UC2 560 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 AACSQ86V21 672 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 CLASRPQ8N2M8 674 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 DCLK2Q8N568 766 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 SAMD3Q8N6K7 520 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 CALML6Q8TD86 181 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 ZSWIM4Q9H7M6 989 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 PAG1Q9NWQ8 432 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 UCKL1Q9NWZ5 548 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 SYBUQ9NX95 663 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 FBXO4Q9UKT5 387 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 FRMD4BQ9Y2L6 1034 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 MRPL42Q9Y6G3 142 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 R4GN57 208 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 GPR179Q6PRD1 2367 aa4.22□□□□□ -1.73
PDLIM5-218ENST00000513341 NRCAMQ92823 1304 aa4.21□□□□□ -1.73
PDLIM5-218ENST00000513341 UBE2QL1A1L167 161 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 ZNF561-AS1K7EIQ3 104 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 SLC30A4O14863 429 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 LRP3O75074 770 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 BCAR3O75815 825 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 FGF18O76093 207 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 RECQL4O94761 1208 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 CHRNA1P02708 482 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 PROS1P07225 676 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 SMIM10L2AP0DMW4 78 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 SMIM10L2BP0DMW5 78 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 HSPD1P10809 573 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 PABPC1P11940 636 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 LAG3P18627 525 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 ZFP36P26651 326 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 SHC2P98077 582 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 KRT17Q04695 432 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 BMS1Q14692 1282 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 LONRF2Q1L5Z9 754 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 HSDL1Q3SXM5 330 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 CELF3Q5SZQ8 465 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 SYDE2Q5VT97 1194 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 SLC30A10Q6XR72 485 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 RTN4RL1Q86UN2 441 aaPredicted RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 PTRH1Q86Y79 214 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 TDRD5Q8NAT2 981 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 VN1R2Q8NFZ6 395 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 SCARB1Q8WTV0 552 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 MRPS27Q92552 414 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 FBXW5Q969U6 566 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 SPATA33Q96N06 139 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 TTC14Q96N46 770 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 RMDN3Q96TC7 470 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 NACAP1Q9BZK3 213 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 PUS7LQ9H0K6 701 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 POMKQ9H5K3 350 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 ERVK-5Q9HDB9 667 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 SNTG2Q9NY99 539 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 NCDNQ9UBB6 729 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 ANGPTL2Q9UKU9 493 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 ISY1Q9ULR0 285 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 DUSP12Q9UNI6 340 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 STX8Q9UNK0 236 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 PCDHGA2Q9Y5H1 932 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 PLXNA4Q9HCM2 1894 aa4.21□□□□□ -1.74
PDLIM5-218ENST00000513341 CACNA1IQ9P0X4 2223 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms