RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 TULP2O00295 520 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 SLC9A3R1O14745 358 aaPredicted RBP12.67□□□□□ -0.38
CDK7-208ENST00000512687 ID4P47928 161 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 FMO5P49326 533 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 STX17P56962 302 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 KDSRQ06136 332 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 LRMPQ12912 555 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 CUL2Q13617 745 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 SIM2Q14190 667 aaPredicted RBP12.67□□□□□ -0.38
CDK7-208ENST00000512687 DMC1Q14565 340 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 ARHGAP17Q68EM7 881 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 LAIR1Q6GTX8 287 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 SYT13Q7L8C5 426 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 CCDC186Q7Z3E2 898 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 TTC30AQ86WT1 665 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 PHTF2Q8N3S3 785 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 USP33Q8TEY7 942 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 NELFBQ8WX92 580 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 CEP63Q96MT8 703 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 GTPBP4Q9BZE4 634 aaKnown RBP12.67□□□□□ -0.38
CDK7-208ENST00000512687 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDK7-208ENST00000512687 SLC8A2Q9UPR5 921 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 SH3BP1Q9Y3L3 701 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 USP3Q9Y6I4 520 aa12.67□□□□□ -0.38
CDK7-208ENST00000512687 NYNRINQ9P2P1 1898 aaKnown RBP12.67□□□□□ -0.38
CDK7-208ENST00000512687 CKAP5Q14008 2032 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 ATG13O75143 517 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 RARGP13631 454 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 HNRNPLP14866 589 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDK7-208ENST00000512687 TRIM21P19474 475 aaKnown RBP12.66□□□□□ -0.38
CDK7-208ENST00000512687 SPEM2Q0P670 501 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 STIM1Q13586 685 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 GOLGA7BQ2TAP0 167 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 RAB41Q5JT25 222 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 BHLHA9Q7RTU4 235 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 ETFBKMTQ8IXQ9 262 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 FAM160A2Q8N612 972 aaPredicted RBP12.66□□□□□ -0.38
CDK7-208ENST00000512687 LMO3Q8TAP4 145 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 KAT5Q92993 513 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 EXOC4Q96A65 974 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 P2RY11Q96G91 374 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 NACA2Q9H009 215 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 ZDHHC4Q9NPG8 344 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 TBC1D14Q9P2M4 693 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 GMEB2Q9UKD1 530 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 RAB23Q9ULC3 237 aa12.66□□□□□ -0.38
CDK7-208ENST00000512687 MUC22E2RYF6 1773 aaPredicted RBP12.66□□□□□ -0.38
CDK7-208ENST00000512687 CACNA1AO00555 2505 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 ADAMTS9Q9P2N4 1935 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 TRIM24O15164 1050 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 HOXC11O43248 304 aaPredicted RBP12.65□□□□□ -0.38
CDK7-208ENST00000512687 ADH1CP00326 375 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 CALCAP01258 141 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 CNR2P34972 360 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 ATP5C1P36542 298 aaKnown RBP12.65□□□□□ -0.38
CDK7-208ENST00000512687 EIF2DP41214 584 aaKnown RBP12.65□□□□□ -0.38
CDK7-208ENST00000512687 CCDC40Q4G0X9 1142 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 C2orf27AQ580R0 203 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 EMC10Q5UCC4 262 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 HTR3DQ70Z44 454 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 CEP68Q76N32 757 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.65□□□□□ -0.38
CDK7-208ENST00000512687 KBTBD6Q86V97 674 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 PIGZQ86VD9 579 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 TMEM25Q86YD3 366 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 ARHGEF19Q8IW93 802 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 TTC39CQ8N584 583 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 CCDC33Q8N5R6 958 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 NAT16Q8N8M0 369 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 GAB3Q8WWW8 586 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 NDRG1Q92597 394 aaKnown RBP12.65□□□□□ -0.38
CDK7-208ENST00000512687 ACDQ96AP0 544 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 OTUB2Q96DC9 234 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 PNKPQ96T60 521 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 FAM124BQ9H5Z6 455 aaPredicted RBP12.65□□□□□ -0.38
CDK7-208ENST00000512687 METTL14Q9HCE5 456 aaKnown RBP12.65□□□□□ -0.38
CDK7-208ENST00000512687 SPHK2Q9NRA0 654 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 NAGPAQ9UK23 515 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 TSPAN16Q9UKR8 245 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 PI4KAP42356 2102 aa12.65□□□□□ -0.38
CDK7-208ENST00000512687 CCDC163A0A0D9SF12 145 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 PMM2O15305 246 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 RPP40O75818 363 aaKnown RBP12.64□□□□□ -0.39
CDK7-208ENST00000512687 STC2O76061 302 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 KAT7O95251 611 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 APODP05090 189 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 RETP07949 1114 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 PPP1R2P41236 205 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 KIR2DL1P43626 348 aaPredicted RBP12.64□□□□□ -0.39
CDK7-208ENST00000512687 GAD2Q05329 585 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 PDE4CQ08493 712 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 PAK1Q13153 545 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 C10orf120Q5SQS8 335 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 KLHDC10Q6PID8 442 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 FOXR2Q6PJQ5 311 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 TMEM92Q6UXU6 159 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 Q6ZNB5 142 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 TRIM59Q8IWR1 403 aa12.64□□□□□ -0.39
CDK7-208ENST00000512687 CAMKK1Q8N5S9 505 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms