RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 CWH43Q9H720 699 aa25.38■■□□□ 1.65
SPOCK3-221ENST00000512648 OGFRQ9NZT2 677 aa25.38■■□□□ 1.65
SPOCK3-221ENST00000512648 TET1Q8NFU7 2136 aa25.38■■□□□ 1.65
SPOCK3-221ENST00000512648 CST8O60676 142 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 F9P00740 461 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 CD48P09326 243 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 TFE3P19532 575 aaPredicted RBP25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 IL4RP24394 825 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 BYSLQ13895 437 aaKnown RBP25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 OASLQ15646 514 aaKnown RBP25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 SLC39A12Q504Y0 691 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 MFSD5Q6N075 450 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 ANKS3Q6ZW76 656 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 GSPT2Q8IYD1 628 aaKnown RBP25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 CCHCR1Q8TD31 782 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 C2orf15Q8WU43 125 aaKnown RBP25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 ATG4AQ8WYN0 398 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 NDRG1Q92597 394 aaKnown RBP25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 PLEKHA4Q9H4M7 779 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 PCDH18Q9HCL0 1135 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 RCOR3Q9P2K3 495 aaPredicted RBP25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 PCDHB5Q9Y5E4 795 aa25.37■■□□□ 1.65
SPOCK3-221ENST00000512648 TRIM43BA6NCK2 446 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 APOC4-APOC2K7ER74 178 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 APOC2P02655 101 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 AMHP03971 560 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 ITGAVP06756 1048 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 USP17L7P0C7H9 530 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 RDXP35241 583 aaKnown RBP25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 SULT1E1P49888 294 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 VCPP55072 806 aaKnown RBP25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 SNX1Q13596 522 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 OTUD1Q5VV17 481 aaPredicted RBP25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 SND1Q7KZF4 910 aaKnown RBP eCLIP25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 DDX42Q86XP3 938 aaKnown RBP eCLIP25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 RNF168Q8IYW5 571 aaPredicted RBP25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 TRIM43Q96BQ3 446 aaPredicted RBP25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 MAK16Q9BXY0 300 aaKnown RBP25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 RHOBTB2Q9BYZ6 727 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 ACBD3Q9H3P7 528 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 ZDHHC18Q9NUE0 388 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 WHRNQ9P202 907 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 COL4A4P53420 1690 aaPredicted RBP25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 SCN5AQ14524 2016 aa25.36■■□□□ 1.65
SPOCK3-221ENST00000512648 TRIM66O15016 1216 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 ITIH2P19823 946 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 L1CAMP32004 1257 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 ALDH7A1P49419 539 aaKnown RBP25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 GPR17Q13304 367 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 HLTFQ14527 1009 aaKnown RBP eCLIP25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 KRT81Q14533 505 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 PPP1R7Q15435 360 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 HFE2Q6ZVN8 426 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 TMEM199Q8N511 208 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 NTAN1Q96AB6 310 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 TTPALQ9BTX7 342 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 IL37Q9NZH6 218 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 GRHL1Q9NZI5 618 aa25.35■■□□□ 1.65
SPOCK3-221ENST00000512648 CAPN9O14815 690 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 BAIAP3O94812 1187 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 CYP2F1P24903 491 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 HSPA9P38646 679 aaKnown RBP25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 GRIK1P39086 918 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 KRT17Q04695 432 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 SYPL2Q5VXT5 272 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 CCDC89Q8N998 374 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 CALN1Q9BXU9 219 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 DPH5Q9H2P9 285 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 RC3H2Q9HBD1 1191 aaKnown RBP25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 COMMD8Q9NX08 183 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 DNPEPQ9ULA0 475 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 FZD10Q9ULW2 581 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 SNX24Q9Y343 169 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 FAM153BP0C7A2 387 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 IVDP26440 423 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 TNNT3P45378 269 aaPredicted RBP25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 RPL21P46778 160 aaKnown RBP25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 FAM153CQ494X1 144 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 ANKRD20A8PQ5CZ79 823 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 SPDYCQ5MJ68 293 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 BSPRYQ5W0U4 402 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 SLC9A4Q6AI14 798 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 RFX6Q8HWS3 928 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 BBOF1Q8ND07 529 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 SPPL2BQ8TCT7 592 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 ART4Q93070 314 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 LRRC45Q96CN5 670 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 CEP295NLQ96MC4 621 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 MTMR10Q9NXD2 777 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 CALCOCO1Q9P1Z2 691 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 FAM153AQ9UHL3 310 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 HPCAL4Q9UM19 191 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 AP4E1Q9UPM8 1137 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 NAALADL1Q9UQQ1 740 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 BACE2Q9Y5Z0 518 aa25.34■■□□□ 1.65
SPOCK3-221ENST00000512648 M0QYT0 321 aa25.33■■□□□ 1.65
SPOCK3-221ENST00000512648 OR4Q2P0C623 313 aa25.33■■□□□ 1.65
SPOCK3-221ENST00000512648 RAG1P15918 1043 aa25.33■■□□□ 1.65
SPOCK3-221ENST00000512648 ZFXP17010 805 aaPredicted RBP25.33■■□□□ 1.65
SPOCK3-221ENST00000512648 TGM2P21980 687 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms