RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 KATNAL2Q8IYT4 538 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 RCOR2Q8IZ40 523 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 TNS4Q8IZW8 715 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 FUKQ8N0W3 1084 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 EMC1Q8N766 993 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 NOA1Q8NC60 698 aaKnown RBP8.46□□□□□ -1.06
HTT-209ENST00000512068 EXD1Q8NHP7 514 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 JOSD2Q8TAC2 188 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 RXFP2Q8WXD0 754 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 KCTD13Q8WZ19 329 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 ALG3Q92685 438 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 CD101Q93033 1021 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 PCED1BQ96HM7 432 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 KRT12Q99456 494 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 LPIN3Q9BQK8 851 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 CNPY3Q9BT09 278 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 AP1M1Q9BXS5 423 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 OXCT2Q9BYC2 517 aaPredicted RBP8.46□□□□□ -1.06
HTT-209ENST00000512068 B3GNT5Q9BYG0 378 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 TRIM7Q9C029 511 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 SLITRK6Q9H5Y7 841 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 ZWILCHQ9H900 591 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 CRTAC1Q9NQ79 661 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 HOMER3Q9NSC5 361 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 RBM12Q9NTZ6 932 aaKnown RBP8.46□□□□□ -1.06
HTT-209ENST00000512068 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.46□□□□□ -1.06
HTT-209ENST00000512068 SMARCAL1Q9NZC9 954 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 EHD2Q9NZN4 543 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 TJP2Q9UDY2 1190 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 DNAJB4Q9UDY4 337 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 NME7Q9Y5B8 376 aa8.46□□□□□ -1.06
HTT-209ENST00000512068 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 TCRBV5S1A1TA0A578 114 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 MYBPHLA2RUH7 354 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 LRRD1A4D1F6 860 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 F8VP50 259 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 TULP2O00295 520 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 CDK2AP1O14519 115 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 KIAA0355O15063 1070 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 PHF2O75151 1096 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 DAB1O75553 588 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 TJP3O95049 919 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 ITGB1P05556 798 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 GLI1P08151 1106 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 PYGMP11217 842 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 BDNFP23560 247 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 WEE1P30291 646 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 PCK1P35558 622 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 GRIK1P39086 918 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 MARCKSL1P49006 195 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 SLC11A1P49279 550 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 GATMP50440 423 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 PEX5P50542 639 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 TKTL1P51854 596 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 SMARCB1Q12824 385 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 KRT81Q14533 505 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 NAA30Q147X3 362 aaPredicted RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 GPNMBQ14956 572 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 BRD3Q15059 726 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 TLR1Q15399 786 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 SLC39A12Q504Y0 691 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 C6orf118Q5T5N4 469 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 DCAF12L1Q5VU92 463 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 KIAA1841Q6NSI8 718 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 SCYL2Q6P3W7 929 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 OLFML1Q6UWY5 402 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 CLEC20AQ6ZU45 233 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 SLC26A9Q7LBE3 791 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 POLNQ7Z5Q5 900 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 MTERF4Q7Z6M4 381 aaKnown RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 ADAT2Q7Z6V5 191 aaKnown RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 SLC13A5Q86YT5 568 aaPredicted RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 MAP7D3Q8IWC1 876 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 IFT20Q8IY31 132 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 KCTD6Q8NC69 237 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 GRK7Q8WTQ7 553 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 MAGOHBQ96A72 148 aaKnown RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 MAK16Q9BXY0 300 aaKnown RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 UBXN6Q9BZV1 441 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 GRIP2Q9C0E4 1043 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 RAB17Q9H0T7 212 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 NGRNQ9NPE2 291 aaKnown RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 ATP13A2Q9NQ11 1180 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 CNGB3Q9NQW8 809 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 ABI2Q9NYB9 513 aaPredicted RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 UTP11Q9Y3A2 253 aaKnown RBP8.45□□□□□ -1.06
HTT-209ENST00000512068 PCDHB5Q9Y5E4 795 aa8.45□□□□□ -1.06
HTT-209ENST00000512068 CCDC151A5D8V7 595 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 C2CD4BA6NLJ0 364 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 PAPSS1O43252 624 aaPredicted RBP8.44□□□□□ -1.06
HTT-209ENST00000512068 HEXIM1O94992 359 aaKnown RBP8.44□□□□□ -1.06
HTT-209ENST00000512068 OAZ2O95190 189 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 CSF2RAP15509 400 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 LAG3P18627 525 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 CHRNA3P32297 505 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 RDXP35241 583 aaKnown RBP8.44□□□□□ -1.06
HTT-209ENST00000512068 SULT1E1P49888 294 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 ARPP19P56211 112 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms