RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 XPO1O14980 1071 aaKnown RBP13.97□□□□□ -0.17
RNF4-215ENST00000511843 GREM1O60565 184 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 FGFR1OPO95684 399 aaKnown RBP13.97□□□□□ -0.17
RNF4-215ENST00000511843 LMNAP02545 664 aaKnown RBP13.97□□□□□ -0.17
RNF4-215ENST00000511843 HMBSP08397 361 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 ADH5P11766 374 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 SLC9A1P19634 815 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 DRD1P21728 446 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 MTIF2P46199 727 aaKnown RBP13.97□□□□□ -0.17
RNF4-215ENST00000511843 AMPD2Q01433 879 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 ADIGQ0VDE8 80 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 BST2Q10589 180 aaKnown RBP13.97□□□□□ -0.17
RNF4-215ENST00000511843 LPAL2Q16609 132 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 TPD52L1Q16890 204 aaPredicted RBP13.97□□□□□ -0.17
RNF4-215ENST00000511843 RAB41Q5JT25 222 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 BHLHA9Q7RTU4 235 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 TMEM25Q86YD3 366 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 NAT16Q8N8M0 369 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 RPLP0P6Q8NHW5 317 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 UBE2TQ9NPD8 197 aaPredicted RBP13.97□□□□□ -0.17
RNF4-215ENST00000511843 TBC1D14Q9P2M4 693 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 RASAL2Q9UJF2 1139 aa13.97□□□□□ -0.17
RNF4-215ENST00000511843 FAM186AA6NE01 2351 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 M0QYV0 167 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 LILRB5O75023 590 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 GABBR2O75899 941 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 ZBED1O96006 694 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 PAEPP09466 180 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 KRT5P13647 590 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 LCP1P13796 627 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 ZNF132P52740 706 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 SLC8A3P57103 927 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 YWHAGP61981 247 aaKnown RBP eCLIP13.96□□□□□ -0.17
RNF4-215ENST00000511843 GCNT1Q02742 428 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 EFEMP1Q12805 493 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 PKDCCQ504Y2 493 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 TRIM65Q6PJ69 517 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 SYNPOQ8N3V7 929 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 DCLK2Q8N568 766 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 SUMF1Q8NBK3 374 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 SECISBP2LQ93073 1101 aaKnown RBP13.96□□□□□ -0.17
RNF4-215ENST00000511843 GBP4Q96PP9 640 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 UBXN6Q9BZV1 441 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 ZDHHC4Q9NPG8 344 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 ACP6Q9NPH0 428 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 DNMT3LQ9UJW3 386 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 AJAP1Q9UKB5 411 aaPredicted RBP13.96□□□□□ -0.17
RNF4-215ENST00000511843 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.96□□□□□ -0.176e-6■■■■■ 55.1
RNF4-215ENST00000511843 SPAG17Q6Q759 2223 aa13.96□□□□□ -0.17
RNF4-215ENST00000511843 RIF1Q5UIP0 2472 aaKnown RBP13.95□□□□□ -0.18
RNF4-215ENST00000511843 K7EQS6 105 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 TRIM24O15164 1050 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 STC2O76061 302 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 ADH1CP00326 375 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 RALAP11233 206 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 PPP2R5DQ14738 602 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 ARHGAP44Q17R89 818 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 ANO4Q32M45 955 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 C2orf27AQ580R0 203 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 PMF1Q6P1K2 205 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 LCLAT1Q6UWP7 414 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 TPGS1Q6ZTW0 290 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 HTR3DQ70Z44 454 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 RSRC2Q7L4I2 434 aaKnown RBP13.95□□□□□ -0.18
RNF4-215ENST00000511843 CLEC4CQ8WTT0 213 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 EDEM1Q92611 657 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 BHMTQ93088 406 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 IPO9Q96P70 1041 aaKnown RBP13.95□□□□□ -0.18
RNF4-215ENST00000511843 HHIPQ96QV1 700 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 HINFPQ9BQA5 517 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 SPHK2Q9NRA0 654 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 DMXL1Q9Y485 3027 aa13.95□□□□□ -0.18
RNF4-215ENST00000511843 YJEFN3A6XGL0 299 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 E7ENQ6 273 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 NEDD8-MDP1E9PL57 170 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 KLKB1P03952 638 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 SETSIPP0DME0 302 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 USP8P40818 1118 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 PLA2G4AP47712 749 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 PSEN1P49768 467 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 NRLP54845 237 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 CNGA2Q16280 664 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 EMC10Q5UCC4 262 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 PM20D1Q6GTS8 502 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 DENND1BQ6P3S1 775 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 GBP6Q6ZN66 633 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 SIX6OS1Q8N1H7 587 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 PHTF2Q8N3S3 785 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 CCDC33Q8N5R6 958 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 KIAA1958Q8N8K9 716 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 SLC35F5Q8WV83 523 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 OTUB2Q96DC9 234 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 P2RY11Q96G91 374 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 FAM126AQ9BYI3 521 aaPredicted RBP13.94□□□□□ -0.18
RNF4-215ENST00000511843 SEMA4AQ9H3S1 761 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 THAP9Q9H5L6 903 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 ARHGEF4Q9NR80 690 aa13.94□□□□□ -0.18
RNF4-215ENST00000511843 SAMSN1Q9NSI8 373 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms