RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 KIAA1549LQ6ZVL6 1849 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 CELSR3Q9NYQ7 3312 aa7.24□□□□□ -1.25
COPS4-209ENST00000511653 CCDC169A6NNP5 214 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 E9PMD0 336 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 K7ERI5 159 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 ARNTLO00327 626 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 SYN3O14994 580 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 SHOXO15266 292 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 CBFA2T2O43439 604 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 HIP1RO75146 1068 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 KCNE1P15382 129 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 ELF1P32519 619 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 PMS1P54277 932 aaKnown RBP7.23□□□□□ -1.25
COPS4-209ENST00000511653 SLC7A5Q01650 507 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 SATB1Q01826 763 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 DMWDQ09019 674 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 TWF1Q12792 350 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 NFKBIBQ15653 356 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 TTC38Q5R3I4 469 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 STXBP5Q5T5C0 1151 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 HAUS3Q68CZ6 603 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 PDZD4Q76G19 769 aaPredicted RBP7.23□□□□□ -1.25
COPS4-209ENST00000511653 KCNK18Q7Z418 384 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 TOP6BLQ8N6T0 577 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 SMARCD2Q92925 531 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 KCNF1Q9H3M0 494 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 ZFP14Q9HCL3 533 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 ZNF334Q9HCZ1 680 aaPredicted RBP7.23□□□□□ -1.25
COPS4-209ENST00000511653 C2orf42Q9NWW7 574 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 TUBGCP4Q9UGJ1 667 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.23□□□□□ -1.25
COPS4-209ENST00000511653 PIAS3Q9Y6X2 628 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 ABCA7Q8IZY2 2146 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 NUP205Q92621 2012 aa7.23□□□□□ -1.25
COPS4-209ENST00000511653 FAM95CA0A1B0GW59 222 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 HMX2A2RU54 273 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 NCAM2O15394 837 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 SUSD5O60279 629 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 OR4Q2P0C623 313 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 MYL4P12829 197 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 PSMC3P17980 439 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 CDC25AP30304 524 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 NEK4P51957 841 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 EPHA5P54756 1037 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 SPAG1Q07617 926 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 SRSF5Q13243 272 aaKnown RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 ORC2Q13416 577 aaPredicted RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 TEAD2Q15562 447 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 CTXN3Q4LDR2 81 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 ZNF280DQ6N043 979 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 MPZL3Q6UWV2 235 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 Q6ZS52 159 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 BEND4Q6ZU67 534 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 TMC8Q8IU68 726 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 CCDC83Q8IWF9 413 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 IGSF22Q8N9C0 903 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 MFSD2AQ8NA29 543 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 SHKBP1Q8TBC3 707 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 ZSCAN18Q8TBC5 510 aaPredicted RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 C8orf76Q96K31 380 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 TBC1D32Q96NH3 1257 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 ACAP3Q96P50 834 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 NELL2Q99435 816 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 TRMT61BQ9BVS5 477 aaKnown RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 MRPL4Q9BYD3 311 aaKnown RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 HAPLN2Q9GZV7 340 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 LMAN1LQ9HAT1 526 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 TOPORSQ9NS56 1045 aaPredicted RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 RBM12Q9NTZ6 932 aaKnown RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 SLC38A7Q9NVC3 462 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 ANKFY1Q9P2R3 1169 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 AFF4Q9UHB7 1163 aaKnown RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 ZMYM5Q9UJ78 669 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 MRPS17Q9Y2R5 130 aaKnown RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 TMA7Q9Y2S6 64 aaKnown RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 YIPF1Q9Y548 306 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 NUB1Q9Y5A7 615 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 U3KQE9 123 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 ANAPC1Q9H1A4 1944 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 ASCC3Q8N3C0 2202 aaKnown RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 HEPACAM2A8MVW5 462 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 SLC16A4O15374 487 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 CLEC3AO75596 197 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 CXCL8P10145 99 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 MCF2P10911 925 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 CHRNB1P11230 501 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 MUTP22033 750 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 CCNE1P24864 410 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 CCNFP41002 786 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 PI4KAP42356 2102 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 TOB1P50616 345 aaPredicted RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 GUCY2FP51841 1108 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 DMP1Q13316 513 aaPredicted RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 SQSTM1Q13501 440 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 SAFBQ15424 915 aaKnown RBP eCLIP7.22□□□□□ -1.25
COPS4-209ENST00000511653 IL17AQ16552 155 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 SLC10A6Q3KNW5 377 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 TPGS2Q68CL5 300 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 RINT1Q6NUQ1 792 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 TTC9BQ8N6N2 239 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms