RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 INPPL1O15357 1258 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 AKAP10O43572 662 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 NDUFB8O95169 186 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 SYF2O95926 243 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 HMGB1P09429 215 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 RECQLP46063 649 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 POLD2P49005 469 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 ARFIP2P53365 341 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 KEAP1Q14145 624 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 PFKFB3Q16875 520 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 CCDC157Q569K6 752 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 LMBRD2Q68DH5 695 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 ZNF793Q6ZN11 406 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 RFX8Q6ZV50 586 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 SPATA2LQ8IUW3 424 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 SPARTQ8N0X7 666 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 NUDCD2Q8WVJ2 157 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 MSI2Q96DH6 328 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 MTFMTQ96DP5 389 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 TM2D2Q9BX73 214 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 MYLK2Q9H1R3 596 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 PIH1D1Q9NWS0 290 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 ZSCAN32Q9NX65 697 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 FZD4Q9ULV1 537 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 PCDHA7Q9UN72 937 aa3.49□□□□□ -1.85
SCAMP1-204ENST00000511551 SPATA31A1Q5TZJ5 1347 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 PLAUP00749 431 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 CDK11BP21127 795 aaKnown RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 CCND1P24385 295 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 CDKN1CP49918 316 aaPredicted RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 CTBP1Q13363 440 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 FBXL22Q6P050 247 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 RBM23Q86U06 439 aaKnown RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 PRPF38AQ8NAV1 312 aaKnown RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 PLBD2Q8NHP8 589 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 TMEM255BQ8WV15 326 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 KBTBD7Q8WVZ9 684 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 MIB2Q96AX9 1013 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 MTMR8Q96EF0 704 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 MVB12AQ96EY5 273 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 P2RY11Q96G91 374 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 P2RX7Q99572 595 aaKnown RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 DPH1Q9BZG8 443 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 MS4A7Q9GZW8 240 aaPredicted RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 MLXIPLQ9NP71 852 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 CD93Q9NPY3 652 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 TYW1Q9NV66 732 aaKnown RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 DDX56Q9NY93 547 aaKnown RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 MSRB1Q9NZV6 116 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 ERRFI1Q9UJM3 462 aaPredicted RBP3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 SPEF1Q9Y4P9 236 aa3.48□□□□□ -1.85
SCAMP1-204ENST00000511551 WASHC2CQ9Y4E1 1318 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 A0A087WYN8 130 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 TMEM272A0A1B0GTI8 110 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 RRHO14718 337 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 FYB1O15117 783 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 ATG13O75143 517 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 MCM5P33992 734 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 P2RX3P56373 397 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 ANAPC15P60006 121 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 HILS1P60008 231 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 GPC5P78333 572 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 LTBQ06643 244 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 NFATC4Q14934 902 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 CATIPQ7Z7H3 387 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 FBXL14Q8N1E6 418 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 SLC44A5Q8NCS7 719 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 DNAJB14Q8TBM8 379 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 JPH3Q8WXH2 748 aaPredicted RBP3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 ATP2A3Q93084 1043 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 TRMT61AQ96FX7 289 aaKnown RBP3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 SLITRK1Q96PX8 696 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 SCNM1Q9BWG6 230 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 TRIM54Q9BYV2 358 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 GTPBP4Q9BZE4 634 aaKnown RBP3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 AGO4Q9HCK5 861 aaKnown RBP3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 CNNM1Q9NRU3 951 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 STXBP5LQ9Y2K9 1186 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 CDY1Q9Y6F8 540 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 EVPLQ92817 2033 aa3.47□□□□□ -1.85
SCAMP1-204ENST00000511551 NOTCH3Q9UM47 2321 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 A0A088AWK7 358 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 TRBV5-3A0A0A0MS03 114 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 A8MVJ9 347 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 USP12O75317 370 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 KATNA1O75449 491 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 ALDH2P05091 517 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 AKAP5P24588 427 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 EVA1CP58658 441 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 DEUP1Q05D60 604 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 TMEM240Q5SV17 173 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 PNPLA1Q8N8W4 532 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 NGDNQ8NEJ9 315 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 RAPGEF4Q8WZA2 1011 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 NEUROG1Q92886 237 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 MED30Q96HR3 178 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 NUAK2Q9H093 628 aa3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 DNMT3BQ9UBC3 853 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-204ENST00000511551 CPA4Q9UI42 421 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms