RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 MAMDC4Q6UXC1 1216 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 LRRC55Q6ZSA7 311 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 KRT27Q7Z3Y8 459 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 TRABD2AQ86V40 505 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 NME8Q8N427 588 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 FAM109AQ8N4B1 249 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 TCP11L2Q8N4U5 519 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 B3GALNT2Q8NCR0 500 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 SUN3Q8TAQ9 357 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 BOD1Q96IK1 185 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 SSBP3Q9BWW4 388 aaPredicted RBP5.3□□□□□ -1.56
MBD4-209ENST00000511009 TWSG1Q9GZX9 223 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 GLOD4Q9HC38 313 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 G6PC2Q9NQR9 355 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 NKX1-2Q9UD57 310 aaPredicted RBP5.3□□□□□ -1.56
MBD4-209ENST00000511009 KCND3Q9UK17 655 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 BAG5Q9UL15 447 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 RIMKLBQ9ULI2 386 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 ARHGAP26Q9UNA1 814 aa5.3□□□□□ -1.56
MBD4-209ENST00000511009 DRG1Q9Y295 367 aaKnown RBP5.3□□□□□ -1.56
MBD4-209ENST00000511009 AHRRA9YTQ3 701 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 EXOC5O00471 708 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 PPM1DO15297 605 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 ZNF623O75123 536 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 LDHCP07864 332 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 ATP1A3P13637 1013 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 TIRAPP58753 221 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 RNASELQ05823 741 aaKnown RBP5.29□□□□□ -1.56
MBD4-209ENST00000511009 CHRNDQ07001 517 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 RESTQ13127 1097 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 TMEM196Q5HYL7 178 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 MAP3K21Q5TCX8 1036 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 SP5Q6BEB4 398 aaPredicted RBP5.29□□□□□ -1.56
MBD4-209ENST00000511009 C1orf122Q6ZSJ8 110 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 P3H2Q8IVL5 708 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 REXO5Q96IC2 774 aaKnown RBP5.29□□□□□ -1.56
MBD4-209ENST00000511009 TWNKQ96RR1 684 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 WDR24Q96S15 920 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 HAPLN3Q96S86 360 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 GPR20Q99678 358 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 DPCDQ9BVM2 203 aaPredicted RBP5.29□□□□□ -1.56
MBD4-209ENST00000511009 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 GPR63Q9BZJ6 419 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 AMBRA1Q9C0C7 1298 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 CCDC134Q9H6E4 229 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 AKIP1Q9NQ31 210 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 LIN7CQ9NUP9 197 aaKnown RBP5.29□□□□□ -1.56
MBD4-209ENST00000511009 CNOT11Q9UKZ1 510 aaKnown RBP5.29□□□□□ -1.56
MBD4-209ENST00000511009 COL15A1P39059 1388 aa5.29□□□□□ -1.56
MBD4-209ENST00000511009 GAGE12BA1L429 117 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 GAGE12HA6NDE8 117 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 PATE3B3GLJ2 98 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 DHHO43323 396 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 NCR1O76036 304 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 CDKL5O76039 1030 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 TFRCP02786 760 aaKnown RBP5.28□□□□□ -1.56
MBD4-209ENST00000511009 TMEM225BP0DP42 221 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 GATA3P23771 443 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 HTR7P34969 479 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 PBX1P40424 430 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 RXRGP48443 463 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 VAV2P52735 878 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 EIF5P55010 431 aaKnown RBP5.28□□□□□ -1.56
MBD4-209ENST00000511009 EIF4A1P60842 406 aaKnown RBP5.28□□□□□ -1.56
MBD4-209ENST00000511009 EIF2B5Q13144 721 aaKnown RBP5.28□□□□□ -1.56
MBD4-209ENST00000511009 PDCLQ13371 301 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 BFSP2Q13515 415 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 PDE1CQ14123 709 aaPredicted RBP5.28□□□□□ -1.56
MBD4-209ENST00000511009 SMAD1Q15797 465 aaKnown RBP5.28□□□□□ -1.56
MBD4-209ENST00000511009 LY6KQ17RY6 165 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 GALNTL6Q49A17 601 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 CTXN3Q4LDR2 81 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 RABL3Q5HYI8 236 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 ARMC6Q6NXE6 501 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 DSTYKQ6XUX3 929 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 SYNE3Q6ZMZ3 975 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 C4orf50Q6ZRC1 276 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 Q6ZSN1 163 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 ANKS1BQ7Z6G8 1248 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.28□□□□□ -1.56
MBD4-209ENST00000511009 RAB11FIP4Q86YS3 637 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 Q8TCH9 128 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 NACC2Q96BF6 587 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 RRP36Q96EU6 259 aaKnown RBP5.28□□□□□ -1.56
MBD4-209ENST00000511009 ADOQ96SZ5 270 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 SERHL2Q9H4I8 314 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 FBXO28Q9NVF7 368 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 TMLHEQ9NVH6 421 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 PI4KBQ9UBF8 816 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 JAG2Q9Y219 1238 aa5.28□□□□□ -1.56
MBD4-209ENST00000511009 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
MBD4-209ENST00000511009 B4E171 279 aa5.27□□□□□ -1.57
MBD4-209ENST00000511009 TSPAN3O60637 253 aa5.27□□□□□ -1.57
MBD4-209ENST00000511009 BAIAP3O94812 1187 aa5.27□□□□□ -1.57
MBD4-209ENST00000511009 NDUFA10O95299 355 aa5.27□□□□□ -1.57
MBD4-209ENST00000511009 VNN1O95497 513 aa5.27□□□□□ -1.57
MBD4-209ENST00000511009 ITGB3P05106 788 aa5.27□□□□□ -1.57
MBD4-209ENST00000511009 PDHA1P08559 390 aa5.27□□□□□ -1.57
MBD4-209ENST00000511009 CNPP09543 421 aaKnown RBP5.27□□□□□ -1.57
MBD4-209ENST00000511009 HNRNPA1P09651 372 aaKnown RBP eCLIP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms