RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 SUN2Q9UH99 717 aa13□□□□□ -0.33
LIN54-210ENST00000510877 PCSK1NQ9UHG2 260 aa13□□□□□ -0.33
LIN54-210ENST00000510877 H7C0C1 242 aa13□□□□□ -0.33
LIN54-210ENST00000510877 CBX4O00257 560 aa13□□□□□ -0.33
LIN54-210ENST00000510877 MBTPS2O43462 519 aa13□□□□□ -0.33
LIN54-210ENST00000510877 MAGEC1O60732 1142 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TADA3O75528 432 aa13□□□□□ -0.33
LIN54-210ENST00000510877 CD72P21854 359 aa13□□□□□ -0.33
LIN54-210ENST00000510877 ATP5OP48047 213 aa13□□□□□ -0.33
LIN54-210ENST00000510877 NUMBP49757 651 aa13□□□□□ -0.33
LIN54-210ENST00000510877 WDR45BQ5MNZ6 344 aa13□□□□□ -0.33
LIN54-210ENST00000510877 C16orf59Q7L2K0 433 aa13□□□□□ -0.33
LIN54-210ENST00000510877 GPR149Q86SP6 731 aa13□□□□□ -0.33
LIN54-210ENST00000510877 RFX6Q8HWS3 928 aa13□□□□□ -0.33
LIN54-210ENST00000510877 FBXL6Q8N531 539 aa13□□□□□ -0.33
LIN54-210ENST00000510877 HDAC7Q8WUI4 952 aa13□□□□□ -0.33
LIN54-210ENST00000510877 TBC1D31Q96DN5 1066 aa13□□□□□ -0.33
LIN54-210ENST00000510877 ZWILCHQ9H900 591 aa13□□□□□ -0.33
LIN54-210ENST00000510877 WDR6Q9NNW5 1121 aaKnown RBP13□□□□□ -0.33
LIN54-210ENST00000510877 MYO1CO00159 1063 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 SOX1O00570 391 aaPredicted RBP12.99□□□□□ -0.33
LIN54-210ENST00000510877 HOXD8P13378 290 aaPredicted RBP12.99□□□□□ -0.33
LIN54-210ENST00000510877 SERPINB6P35237 376 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 VIPR2P41587 438 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 CCR3P51677 355 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 HYAL1Q12794 435 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 FBXL19Q6PCT2 694 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 BZW1Q7L1Q6 419 aaKnown RBP12.99□□□□□ -0.33
LIN54-210ENST00000510877 RD3Q7Z3Z2 195 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 TMEM209Q96SK2 561 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 SUSD2Q9UGT4 822 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 WNT6Q9Y6F9 365 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 CAPN7Q9Y6W3 813 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 LRRC72A6NJI9 287 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 H3BRJ5 948 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 HNRNPH2P55795 449 aaKnown RBP12.99□□□□□ -0.33
LIN54-210ENST00000510877 MBTPS1Q14703 1052 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 LEXMQ3ZCV2 418 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 CD101Q93033 1021 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 CABS1Q96KC9 395 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 TRIM7Q9C029 511 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 WRAP73Q9P2S5 460 aaPredicted RBP12.99□□□□□ -0.33
LIN54-210ENST00000510877 ANAPC5Q9UJX4 755 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 SPTBN2O15020 2390 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 TMEM221A6NGB7 291 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 CCDC160A6NGH7 325 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 M0R296 226 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 DFFAO00273 331 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 CLDN5O00501 218 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 TACC1O75410 805 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 PTPN5P54829 565 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 FANCCQ00597 558 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 CYP2U1Q7Z449 544 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 OR5B17Q8NGF7 314 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 TSC1Q92574 1164 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 HSPH1Q92598 858 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 GEMIN8Q9NWZ8 242 aaKnown RBP12.99□□□□□ -0.33
LIN54-210ENST00000510877 FNIP2Q9P278 1114 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 TXNDC16Q9P2K2 825 aa12.99□□□□□ -0.33
LIN54-210ENST00000510877 FSBPO95073 299 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 STAMBPO95630 424 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 LTFP02788 710 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 KCNA1Q09470 495 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 HJURPQ8NCD3 748 aaPredicted RBP12.98□□□□□ -0.33
LIN54-210ENST00000510877 IFT43Q96FT9 208 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 PPP1R13BQ96KQ4 1090 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 PNKPQ96T60 521 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 C2orf49Q9BVC5 232 aaPredicted RBP12.98□□□□□ -0.33
LIN54-210ENST00000510877 ZNF518BQ9C0D4 1074 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 MAFFQ9ULX9 164 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 LTBP1Q14766 1721 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 KIF13BQ9NQT8 1826 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 IGKV6-21A0A0C4DH24 114 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 AKR1B15C9JRZ8 316 aaPredicted RBP12.98□□□□□ -0.33
LIN54-210ENST00000510877 BUB1O43683 1085 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 ZBTB17Q13105 803 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 MAP7Q14244 749 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 STAT4Q14765 748 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 MPPE1Q53F39 396 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 APEX2Q9UBZ4 518 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 L1RE1Q9UN81 338 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 MTMR11A4FU01 709 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 KRT86O43790 486 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 YWHAGP61981 247 aaKnown RBP eCLIP12.98□□□□□ -0.33
LIN54-210ENST00000510877 RTL10Q7L3V2 364 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 RMDN1Q96DB5 314 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 LPIN3Q9BQK8 851 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 NUMBLQ9Y6R0 609 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 TTC26A0AVF1 554 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 GFPT1Q06210 699 aaPredicted RBP12.98□□□□□ -0.33
LIN54-210ENST00000510877 RBL2Q08999 1139 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 C11orf57Q6ZUT1 292 aaPredicted RBP12.98□□□□□ -0.33
LIN54-210ENST00000510877 LPCAT2Q7L5N7 544 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 SIPA1Q96FS4 1042 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 TSNARE1Q96NA8 513 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 NTPCRQ9BSD7 190 aaKnown RBP12.98□□□□□ -0.33
LIN54-210ENST00000510877 CARD6Q9BX69 1037 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 MIOSQ9NXC5 875 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 GMIPQ9P107 970 aa12.98□□□□□ -0.33
LIN54-210ENST00000510877 CNTN3Q9P232 1028 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms