RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 ZNF396Q96N95 335 aaPredicted RBP11.02□□□□□ -0.65
DDX41-211ENST00000510171 ACOX2Q99424 681 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 BBS2Q9BXC9 721 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 FBXO44Q9H4M3 255 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 CYP8B1Q9UNU6 501 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 PCDHB9Q9Y5E1 797 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 SPAG17Q6Q759 2223 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 CHD6Q8TD26 2715 aa11.02□□□□□ -0.65
DDX41-211ENST00000510171 NEDD8-MDP1E9PL57 170 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 SH3BP5O60239 455 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 CACNG3O60359 315 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 EXOC3O60645 756 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 PPP6R2O75170 966 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 TBX18O95935 607 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 HSP90AA1P07900 732 aaKnown RBP11.01□□□□□ -0.65
DDX41-211ENST00000510171 TYRP14679 529 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 GNSP15586 552 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 AP3M2P53677 418 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 GOLGA8FQ08AF8 430 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 GOLGA8DPQ0D2H9 430 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 BIRC3Q13489 604 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 STK38Q15208 465 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 TRIP6Q15654 476 aaKnown RBP11.01□□□□□ -0.65
DDX41-211ENST00000510171 ZNF667Q5HYK9 610 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 CNNM4Q6P4Q7 775 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 TPGS1Q6ZTW0 290 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 ACOT1Q86TX2 421 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 FUKQ8N0W3 1084 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 IQUBQ8NA54 791 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 LINC00301Q8NCQ3 95 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 FOXJ1Q92949 421 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 ERLEC1Q96DZ1 483 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 CAMK1GQ96NX5 476 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 GABRG3Q99928 467 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 C7orf25Q9BPX7 421 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 KLF16Q9BXK1 252 aaPredicted RBP11.01□□□□□ -0.65
DDX41-211ENST00000510171 GZF1Q9H116 711 aaPredicted RBP11.01□□□□□ -0.65
DDX41-211ENST00000510171 VRTNQ9H8Y1 702 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.01□□□□□ -0.658e-9■■■■■ 103.2
DDX41-211ENST00000510171 TLR8Q9NR97 1041 aaKnown RBP11.01□□□□□ -0.65
DDX41-211ENST00000510171 KRT82Q9NSB4 513 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 FOXD4L1Q9NU39 408 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 CGNQ9P2M7 1197 aaKnown RBP11.01□□□□□ -0.65
DDX41-211ENST00000510171 SUSD2Q9UGT4 822 aa11.01□□□□□ -0.65
DDX41-211ENST00000510171 LSM7Q9UK45 103 aaKnown RBP11.01□□□□□ -0.65
DDX41-211ENST00000510171 ANK1P16157 1881 aa11□□□□□ -0.65
DDX41-211ENST00000510171 EML5Q05BV3 1969 aa11□□□□□ -0.65
DDX41-211ENST00000510171 PRRT4C9JH25 899 aa11□□□□□ -0.65
DDX41-211ENST00000510171 TAF4O00268 1085 aa11□□□□□ -0.65
DDX41-211ENST00000510171 GFRA2O00451 464 aa11□□□□□ -0.65
DDX41-211ENST00000510171 SPTLC2O15270 562 aa11□□□□□ -0.65
DDX41-211ENST00000510171 GREM1O60565 184 aa11□□□□□ -0.65
DDX41-211ENST00000510171 BEST1O76090 585 aa11□□□□□ -0.65
DDX41-211ENST00000510171 YEATS4O95619 227 aa11□□□□□ -0.65
DDX41-211ENST00000510171 P4HA1P13674 534 aa11□□□□□ -0.65
DDX41-211ENST00000510171 ATP5C1P36542 298 aaKnown RBP11□□□□□ -0.65
DDX41-211ENST00000510171 CASP4P49662 377 aa11□□□□□ -0.65
DDX41-211ENST00000510171 PGFP49763 221 aa11□□□□□ -0.65
DDX41-211ENST00000510171 MAP3K7CLP57077 242 aa11□□□□□ -0.65
DDX41-211ENST00000510171 NCOA4Q13772 614 aa11□□□□□ -0.65
DDX41-211ENST00000510171 E2F4Q16254 413 aa11□□□□□ -0.65
DDX41-211ENST00000510171 KNOP1Q1ED39 458 aaKnown RBP11□□□□□ -0.65
DDX41-211ENST00000510171 BMT2Q1RMZ1 405 aa11□□□□□ -0.65
DDX41-211ENST00000510171 ZNF699Q32M78 642 aa11□□□□□ -0.65
DDX41-211ENST00000510171 WDR45BQ5MNZ6 344 aa11□□□□□ -0.65
DDX41-211ENST00000510171 KIAA1324Q6UXG2 1013 aaKnown RBP11□□□□□ -0.65
DDX41-211ENST00000510171 SCARA5Q6ZMJ2 495 aa11□□□□□ -0.65
DDX41-211ENST00000510171 TOGARAM2Q6ZUX3 1019 aa11□□□□□ -0.65
DDX41-211ENST00000510171 UNC13DQ70J99 1090 aa11□□□□□ -0.65
DDX41-211ENST00000510171 PROSER1Q86XN7 944 aa11□□□□□ -0.65
DDX41-211ENST00000510171 HSCBQ8IWL3 235 aa11□□□□□ -0.65
DDX41-211ENST00000510171 C12orf56Q8IXR9 622 aa11□□□□□ -0.65
DDX41-211ENST00000510171 ZMIZ2Q8NF64 920 aa11□□□□□ -0.65
DDX41-211ENST00000510171 MRGPRX1Q96LB2 322 aa11□□□□□ -0.65
DDX41-211ENST00000510171 SMOQ99835 787 aa11□□□□□ -0.65
DDX41-211ENST00000510171 ZDHHC5Q9C0B5 715 aa11□□□□□ -0.65
DDX41-211ENST00000510171 SDCBP2Q9H190 292 aa11□□□□□ -0.65
DDX41-211ENST00000510171 CSNK1G1Q9HCP0 422 aa11□□□□□ -0.65
DDX41-211ENST00000510171 CD248Q9HCU0 757 aa11□□□□□ -0.65
DDX41-211ENST00000510171 CACNA2D2Q9NY47 1150 aa11□□□□□ -0.65
DDX41-211ENST00000510171 MARK1Q9P0L2 795 aa11□□□□□ -0.65
DDX41-211ENST00000510171 RAD54BQ9Y620 910 aa11□□□□□ -0.65
DDX41-211ENST00000510171 UBE4BO95155 1302 aa11□□□□□ -0.65
DDX41-211ENST00000510171 GJB3O75712 270 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 C4BPAP04003 597 aaKnown RBP10.99□□□□□ -0.65
DDX41-211ENST00000510171 CAPNS1P04632 268 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 CISD3P0C7P0 127 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 CCDC130P13994 396 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 MAOBP27338 520 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 CD6P30203 668 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 PLA2G4AP47712 749 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 DGKGP49619 791 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 SCAPQ12770 1279 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 SGSM1Q2NKQ1 1148 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 NAXDQ8IW45 347 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 CRYBG2Q8N1P7 616 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 GOLGA5Q8TBA6 731 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 PLEKHO2Q8TD55 490 aa10.99□□□□□ -0.65
DDX41-211ENST00000510171 SLC2A14Q8TDB8 520 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms